LOC118947131 (LOC103365236)


Basic Information

Item Value
gene id LOC118947131
gene name LOC103365236
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 107069 ~ 305241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972373.1
CATAGACACAATGCTGAGCTTCTGTATGCAAAGTCAACGTTCCATCTCTTCACCTCTGAATcgttcctcctctttctctcccctctcccttcttacAGAGTTCTTCCTGGAGCTCCTCGACAACAGTGAGAAATCCCTGAATAACATGTTCACGCGGACCTACGGGAAGCTGTACATGCAGAACAGTGAGCTGTTCCAGGACCTGTTCACGGAGCTGAAGCGTTACTACACTGGGGGGAACGTCAACCTGGAGGAGATGCTGAATGACTTCTGGTCCCGTCTGCTAGAGAGGATGTTTCAGCTGCTGAACTCTCAGTACCACTTCACCGACGACTACTTGGAGTGCGTCAGTAAATACACTGACCAGCTGAAGCCTTTCGGTGACGTACCCCGGAAACTAAAGGCCCAGGTTACGAGGGCCTTCATCGCTGCAAGGACCTTCGTCCAGGGCCTCATGGTGGGCAGGGAGGTGGCTAACAGGGTGGCTAAGGTGAATGTGGCCCCCGCCTGCATCAGGGCCCTGACTAAGATGCTGTACTGTCCGTACTGCAGGGGTCTGCCTGGGCTGAAGCCCTGTCATAACTACTGCCATAATGTGATGAGAGGCTGTCTGGCTAACCAGGCTGACCTAGATCCCGAGTGGAACCTCTTCATAGATGCCATGTTGCTGGTAGCTGACCGGCTGGAGGGACCCTTCAACATCGAAGCCATCATGGAACCCATAGATGTGAAGATCTCTGAAGCCATCATGACCATGCAAGACAACAGCatgacagtttcagctaagGTGTTCCAGGGGTGTGGTCAGCCCAAGCCGTCTGGGATGGGCAGCAGCAGATCAGCCAGGGGGATCTCTGATGTCTTCAACGCCCGATTCAGACCCTACAGCCCAGAGGAGAGACCCACCACTGCCGCTGGCACCAGCCTGGACAGACTGaggacagtgtggaggaCAATGCAACACAGCGTGCTAGACATTAAGAAGAAGCTGAAGCAGTCCAAAAAGTTCTGGTCCAACCTGCCAGATGAGATCTGTATTAAAGACAAGTTGACCGAGTCAGATGAAGAGCAGTGTTGGAACAGTCACGCCAAGGCCAGGTATTTTCCTGAGGTGGTAAAGGACGGCCTCACCAACCAGCTGAACAACCCAGAGGTGGCGGTGGACATCACTAGACCGGACACTCTGATTCGCCAACAGATCATGACACTCAGAGTGATGACCAACAAGCTGAGAAACGCCTACAACGGCAACGACATCTTCTTTCAGGACTCCAgtgACGAGGGCAGTGGCAGCAGCAGTGGCTGTACAGAGGGATGTACCACAGAGTTTGTGTTTGTGGGTCCAGAGGCCCCCGTGGTGGGAGCAGACAGGAGTGATGAGCGAGCTTCGGCTGCAGCAGGCAGCGCCCCACATCCCTCCAGACCCTCTCTACCCCTGCTactgaccctctctctcacagCCCTGTCCTGGTCCAGGAGACAATACCAGCTGGCCCGAGAGGACACCAGGACATTACTGCTACTCTGACTCTGGCACCaatcagacagccagccagcaggTCGTCATACTAACTGTTAGTGTTCTCTAAACGGAACCAGAACAGGACAACCCTTTTGGATCCCCACCATGAAGAGATATGGtgacagtagtatactgtagtagacTGAGGAGTGTTGTGAGTGCTGCATCCTGCTTTGTCCCCAAAGATCTCTCTGTTCTAAGATGTTCTGTTCTaatctgctctgttctgctctgttctattctgctctgttctattctgctctgttctattctaatctgtt
>XM_036972374.1
CATAGACACAATGCTGAGCTTCTGTATGCAAAGTCAACGTTCCATCTCTTCACCTCTGAATcgttcctcctctttctctcccctctcccttcttacAGAGTTCTTCCTGGAGCTCCTCGACAACAGTGAGAAATCCCTGAATAACATGTTCACGCGGACCTACGGGAAGCTGTACATGCAGAACAGTGAGCTGTTCCAGGACCTGTTCACGGAGCTGAAGCGTTACTACACTGGGGGGAACGTCAACCTGGAGGAGATGCTGAATGACTTCTGGTCCCGTCTGCTAGAGAGGATGTTTCAGCTGCTGAACTCTCAGTACCACTTCACCGACGACTACTTGGAGTGCGTCAGTAAATACACTGACCAGCTGAAGCCTTTCGGTGACGTACCCCGGAAACTAAAGGCCCAGGTTACGAGGGCCTTCATCGCTGCAAGGACCTTCGTCCAGGGCCTCATGGTGGGCAGGGAGGTGGCTAACAGGGTGGCTAAGGTGAATGTGGCCCCCGCCTGCATCAGGGCCCTGACTAAGATGCTGTACTGTCCGTACTGCAGGGGTCTGCCTGGGCTGAAGCCCTGTCATAACTACTGCCATAATGTGATGAGAGGCTGTCTGGCTAACCAGGCTGACCTAGATCCCGAGTGGAACCTCTTCATAGATGCCATGTTGCTGGTAGCTGACCGGCTGGAGGGACCCTTCAACATCGAAGCCATCATGGAACCCATAGATGTGAAGATCTCTGAAGCCATCATGACCATGCAAGACAACAGCatgacagtttcagctaagGTGTTCCAGGGGTGTGGTCAGCCCAAGCCGTCTGGGATGGGCAGCAGCAGATCAGCCAGGGGGATCTCTGATGTCTTCAACGCCCGATTCAGACCCTACAGCCCAGAGGAGAGACCCACCACTGCCGCTGGCACCAGCCTGGACAGACTGGTGCTAGACATTAAGAAGAAGCTGAAGCAGTCCAAAAAGTTCTGGTCCAACCTGCCAGATGAGATCTGTATTAAAGACAAGTTGACCGAGTCAGATGAAGAGCAGTGTTGGAACAGTCACGCCAAGGCCAGGTATTTTCCTGAGGTGGTAAAGGACGGCCTCACCAACCAGCTGAACAACCCAGAGGTGGCGGTGGACATCACTAGACCGGACACTCTGATTCGCCAACAGATCATGACACTCAGAGTGATGACCAACAAGCTGAGAAACGCCTACAACGGCAACGACATCTTCTTTCAGGACTCCAgtgACGAGGGCAGTGGCAGCAGCAGTGGCTGTACAGAGGGATGTACCACAGAGTTTGTGTTTGTGGGTCCAGAGGCCCCCGTGGTGGGAGCAGACAGGAGTGATGAGCGAGCTTCGGCTGCAGCAGGCAGCGCCCCACATCCCTCCAGACCCTCTCTACCCCTGCTactgaccctctctctcacagCCCTGTCCTGGTCCAGGAGACAATACCAGCTGGCCCGAGAGGACACCAGGACATTACTGCTACTCTGACTCTGGCACCaatcagacagccagccagcaggTCGTCATACTAACTGTTAGTGTTCTCTAAACGGAACCAGAACAGGACAACCCTTTTGGATCCCCACCATGAAGAGATATGGtgacagtagtatactgtagtagacTGAGGAGTGTTGTGAGTGCTGCATCCTGCTTTGTCCCCAAAGATCTCTCTGTTCTAAGATGTTCTGTTCTaatctgctctgttctgctctgttctattctgctctgttctattctgctctgttctattctaatctgtt

Function

NR:

description
glypican-6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972373.1 False 1803 mRNA 0.53 8 107069 305241
XM_036972374.1 True 1773 mRNA 0.53 7 107069 305241

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding downstream 290262 595503 ~ 596337 (+)
LOC110495334 LOC106575937 coding downstream 457338 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 506246 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 640211 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 674352 979593 ~ 1046298 (+)
G2339344 NA non-coding upstream 7577 98520 ~ 99492 (+)
G2339339 NA non-coding upstream 21674 85065 ~ 85395 (+)
G2339334 NA non-coding upstream 28562 78189 ~ 78507 (+)
G2339330 NA non-coding upstream 49979 56851 ~ 57090 (+)
G2339327 NA non-coding upstream 58626 48224 ~ 48443 (+)
G2339348 NA non-coding downstream 3211 308452 ~ 308783 (+)
G2339431 NA non-coding downstream 4223 309464 ~ 309943 (+)
G2339434 NA non-coding downstream 19098 324339 ~ 325971 (+)
G2339465 NA non-coding downstream 119351 424592 ~ 424824 (+)
G2339466 NA non-coding downstream 121009 426250 ~ 426645 (+)
G2339343 NA other upstream 9213 97115 ~ 97856 (+)
G2339478 NA other downstream 157957 463198 ~ 464467 (+)
G2339795 NA other downstream 378103 683344 ~ 685548 (+)
G2339912 NA other downstream 565866 870947 ~ 900840 (+)
G2339955 NA other downstream 667238 972479 ~ 972783 (+)
G2340118 NA other downstream 811702 1116943 ~ 1118969 (+)

Expression


Co-expression Network