LOC118947129


Basic Information

Item Value
gene id LOC118947129
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 595503 ~ 596337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041782.1
AGAGGTATAGCAGagagggaacagtagaacactatacagacagagatatagcagagagggaacagtagaacactatacaGACAGAGagggaacagtagaacactatacaGACAGAGGTATAGCAGagagggaacagtagaacactatacaGACAGAGagggaacagtagaacactatacagacagagagggaacagtagaacactatacaGACAGAGGTATAGCAGagagggaacagtagaacactatacagacagagagggaacagtagaacactatacaGACAGAGagggaacagtagaacactatacaGACAGAGGTATAGCAGagagggaacagtagaacactatacaGACAGAGGTATAGCAGagagggaacagtagaacactatacaGACAGAGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041782.1 True 403 mRNA 0.43 4 595503 596337

Neighbor

gene id symbol gene type direction distance location
LOC118947131 LOC103365236 coding upstream 290262 107069 ~ 305241 (+)
LOC110495334 LOC106575937 coding downstream 166242 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 215150 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 349115 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 383256 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 605700 1202037 ~ 1209051 (+)
G2339522 NA non-coding upstream 6951 572707 ~ 588552 (+)
G2339518 NA non-coding upstream 40592 554236 ~ 554911 (+)
G2339517 NA non-coding upstream 42060 552813 ~ 553443 (+)
G2339512 NA non-coding upstream 48570 546340 ~ 546933 (+)
G2339489 NA non-coding upstream 109477 485791 ~ 486026 (+)
G2339532 NA non-coding downstream 11999 608336 ~ 610581 (+)
G2339547 NA non-coding downstream 59144 655481 ~ 657445 (+)
G2339548 NA non-coding downstream 61465 657802 ~ 658162 (+)
G2339554 NA non-coding downstream 79499 675836 ~ 676782 (+)
G2339791 NA non-coding downstream 83743 680080 ~ 680537 (+)
G2339478 NA other upstream 131036 463198 ~ 464467 (+)
G2339343 NA other upstream 497647 97115 ~ 97856 (+)
G2339795 NA other downstream 87007 683344 ~ 685548 (+)
G2339912 NA other downstream 274770 870947 ~ 900840 (+)
G2339955 NA other downstream 376142 972479 ~ 972783 (+)
G2340118 NA other downstream 520606 1116943 ~ 1118969 (+)

Expression


Co-expression Network