klf5a (LOC106593200)


Basic Information

Item Value
gene id klf5a
gene name LOC106593200
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1305991 ~ 1333394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972375.1
TTTTTGAAACACTAAACCGACTGAACCTGCCCCACGCCCGCCTCGCTTCCTCTCATCGCATGAGTTGACAtggatagaaaagagcagaagctttgAACTATCCCAACAGACTCCAGTCCTACCGAACCGAGACAAAGTGGATAACCCAGTCAGACGAGATCGCTAATTAGACTGCACACAGGCTTGAATAATATACATAGCTACAGTCAGTCCTCTCATGCACCGTCCCGTTTCATCTGTCGCCTCTGTCGTTATTATATGATTATTATTGCGGCCGCTCGCACCTTGTTATTCCGGTGGGGAGTAAATCTATATGGCCGCGACGCTGATCACGATGAGCGCTGGGACCGGGACCGGGCAGGACGAGATGTTCTACACCCTGCTCAAGCCCATGCTTTCGGAAGGCTTCCCGGCCGAGGAGTCGGCTCTGTTCGGTTTCGATACCAAGAACCTACTGACGGAAAGGAGTGGACAGAGTGAATACGCGCACCAGACAGGGAAGAGTGAGCTGGATAAGTACCTCTCCCCCCAGACGCCGCTCCTGATGCCCCATCCTGACCCTCCAGAGCAGAACAAGTCTCGGCGGGACAGTGCCTCTGTGATGGATCACTTCTTTGGCGACGACCAGGGTGGATCTCCTTACAGCATCAACATGAACGTCTTCCTGCCCGACCTGGCCTACCTGAGGATGGGCTTGTGTCGGCCGGCACGCCCAGGGCCTGGGGGTAACGGTGGAGGCATGGGCCAGCAGGTCAAAACAgaacccccttcctcctctcccttcgcCCATCCTCACCCTCACTGCCCCAGCAGTAGCGTCCACAGTAACAGCATCAGCCTTTCCACGGTAACGTCGGTGTCTTCCTCTTCTTCGTTACCAGAGTTCACTAGCGTGTTCAGCCCGTCGGGTGGTGGTGACCCGACCTCTGACGCCGTGGCAACGGGCGGTTCTGTTTACGTGAAGGAGGAGCTGGGGTCGTTCGATCTGCCTCACGACGACTCTCTGTTCCAGCTGCTCTCTGCGGAGCTGGACTCTGCCCCTCTCGCGCCCATGCATCACCACGGCAACAGTGCTCATCACCGGGCGGGGCAGCATCACGGAGGTTCCGGTCCCTCGCCCATCATGCACACCTTCCACGACCTACACTTAGCCGCCCAGGCCCAGCAGCAACACCAACAACTACAGACTGCCAAGGCAAGCTACTGTGGTGGGCTGCACAGCGTGGGAGGGGCCTACCCTCACCCTCACTTCCTCCAGCAGCCCCAGCACCATCAGGCCAAGGCCCCCTAcctgcccccctctcctcccagctcaGAGCCCAGCTCTCCAGATCGTCAGAAGGACCTCCTTCAgaacctctcccctcccccttcctatGCCGCCACTATCGCCTCCAAGCTGGGAGTCAGCGTCTCCCCCAGTCTTTCCCCCACCGGTGTGGCTCGACCCCCAGCCTCAAGTCTAACTCCAGCCCCAGGCTCCGGCCCAGCTCCAAGCCTGAACCAGTCCATGCAGGTCCGCTACAACCGCAGGACCAACCCAGAcctggagaagaggaggataCACCACTGTGACTTCCCAGGATGTAAGAAAGTGTACACCAAGTCTTCCCATCTGAAAGCCCACCTGAGGACCCACACTGgtgAGAAGCCGTACAGGTGTTCGTGGGATGGATGTGACTGGCGTTTCGCCCGTTCTGATGAGTTGACTCGTCACTTCAGGAAACACACAGGGGCCAAACCGTTCCAATGCTCTGTCTGCTCTCGCTCCTTCTCCCGATCGGATCACCTGGCCCTGCATATGAAGAGGCACcagaactaacacacacacacaaaacactagCTGGAATCACAAGGACATGCACTCAAATCAGGAAACGTTCAACCTAAACTGTACAGTGGTACAAAACCACTTTCCTGGAAGATACATTATagtctttatcttggccagggtcgcagttgtaaatgacaactcaactggcctacctggttaaataaaggtgaaattaaataaGTCTTAGACCAGTGGCTCCCAAACCACTTTTCCGGAGTATACCTTGTAGTCTAGACCAGTGGCTCCCAAACTGTGGACAGGGATCCACTTTTGGACAGACCGCCCCTCCCCACCCCACCTAAGCCCCATTTTCACCCAGGAGAAACCCTGCATTGTTACGAATAATTTCAGAATTCTACAGTACATTTCTTGACATTGGTCACAAGTACATTCAGTTAAGTGCGTTGAAGACGAGGGTGGTGTTATTCATCTCTATTTTTATATTTAGTCTCAGTTGTTCTCCCACCGCTCAACCCTCATAGTGGGTCGCGACTCAAGGGACTCCTCaatttatttgggggggggggactctgggttagact

Function

NR:

description
Krueppel-like factor 5

GO: NA

KEGG:

id description
K09206 KLF5; krueppel-like factor 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972375.1 True 2376 mRNA 0.55 4 1305991 1333394

Neighbor

gene id symbol gene type direction distance location
pibf1 pibf1 coding upstream 4709 1216077 ~ 1301282 (+)
blzf1 LOC106575890 coding upstream 97317 1202037 ~ 1209051 (+)
tpp2 tpp2 coding upstream 259693 979593 ~ 1046298 (+)
LOC118947137 NA coding upstream 359978 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 488150 811487 ~ 817841 (+)
LOC118947132 NA coding downstream 20533 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 46874 1380268 ~ 1427883 (+)
LOC110515241 LOC106575016 coding downstream 58969 1392363 ~ 1395554 (+)
G2340203 NA non-coding upstream 2179 1303383 ~ 1303812 (+)
G2340202 NA non-coding upstream 3235 1302200 ~ 1302756 (+)
G2340199 NA non-coding upstream 13825 1289802 ~ 1292166 (+)
G2340198 NA non-coding upstream 17015 1288443 ~ 1288976 (+)
G2340196 NA non-coding upstream 24998 1280096 ~ 1280993 (+)
G2340154 NA non-coding downstream 3507 1336901 ~ 1338965 (+)
G2340213 NA non-coding downstream 5736 1339130 ~ 1339338 (+)
G2340222 NA non-coding downstream 23758 1357152 ~ 1357588 (+)
G2340219 NA non-coding downstream 27099 1360493 ~ 1361588 (+)
G2340118 NA other upstream 187022 1116943 ~ 1118969 (+)
G2339955 NA other upstream 333208 972479 ~ 972783 (+)
G2339912 NA other upstream 432152 870947 ~ 900840 (+)

Expression


Co-expression Network