Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118947132 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493665.1 |
| NCBI id | JAAXML020000242.1 |
| chromosome length | 1484196 |
| location | 1353782 ~ 1354415 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005041786.1 | False | 449 | mRNA | 0.53 | 2 | 1353927 | 1354415 |
| TU2679625 | True | 234 | lncRNA | 0.52 | 2 | 1353782 | 1354196 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| klf5a | LOC106593200 | coding | upstream | 20533 | 1305991 ~ 1333394 (+) |
| pibf1 | pibf1 | coding | upstream | 52645 | 1216077 ~ 1301282 (+) |
| blzf1 | LOC106575890 | coding | upstream | 145253 | 1202037 ~ 1209051 (+) |
| tpp2 | tpp2 | coding | upstream | 307629 | 979593 ~ 1046298 (+) |
| LOC118947137 | NA | coding | upstream | 407914 | 945293 ~ 946912 (+) |
| lmo7b | LOC106575016 | coding | downstream | 25853 | 1380268 ~ 1427883 (+) |
| LOC110515241 | LOC106575016 | coding | downstream | 37948 | 1392363 ~ 1395554 (+) |
| G2340213 | NA | non-coding | upstream | 14589 | 1339130 ~ 1339338 (+) |
| G2340154 | NA | non-coding | upstream | 14962 | 1336901 ~ 1338965 (+) |
| G2340209 | NA | non-coding | upstream | 27065 | 1325169 ~ 1326862 (+) |
| G2340203 | NA | non-coding | upstream | 50115 | 1303383 ~ 1303812 (+) |
| G2340202 | NA | non-coding | upstream | 51171 | 1302200 ~ 1302756 (+) |
| G2340222 | NA | non-coding | downstream | 2737 | 1357152 ~ 1357588 (+) |
| G2340219 | NA | non-coding | downstream | 6078 | 1360493 ~ 1361588 (+) |
| G2340118 | NA | other | upstream | 234958 | 1116943 ~ 1118969 (+) |
| G2339955 | NA | other | upstream | 381144 | 972479 ~ 972783 (+) |
| G2339912 | NA | other | upstream | 480088 | 870947 ~ 900840 (+) |
