LOC110515241 (LOC106575016)


Basic Information

Item Value
gene id LOC110515241
gene name LOC106575016
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1392363 ~ 1395554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972368.1
ggcgttcGTGTTTAATGGCTTTATATCAGGGTTGTGATTGTCATCACGCTAACGGCTACTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACAGCTACTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTTCTGAAACAACTTGCATGAGGCCGGTCCTGTCATCAAGCTAACAGCTACTGAAACAACTAGCGTGTGGCTTTGTCCTGTCATCAAGCTAACAGCTACTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTTCTGAAACAACTTGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTTCTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTTCTGAAACAACTAGCATGAGGCTGGTCCTGTCATCAAGCTAACGGCTACTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTACTGAAACAACTAGCATGAGGCCGGTCCTGTCATCAAGCTAACGGCTAATAAAACTACTAGCGTGAGGCTTGACGTTTGTCTGTATTACTGACATTTCATTTTCTTCAACTGCCACAGGTGGTTTGTTTTTTCTGGGACTGTCTTTGTACCCTTTAGGCTCCAACAAACAAGTTTGGTGAAATACGATGAAGTAGTTTGCCTGTTTCCATGACATTCCTGGAACAGAGCTAGCTGTTGTTTTCCACTAACCCTGGTAGTGCTCAACATGGGTATGTAGTGTTGAACTGTGAAAGGTGTGGCTGCTCCTAACTCTACCCGAAGCCCCGGGTGCTTGTGACGGTGTTTAGTTGGCGTATTGTCCACCTCAGAGTGTTGACGACTACTATAACACAGACGGCTCTGGTTAGCAGCAGTTCCACAGCGTTGTGTGACCAGTGCTCCTAACTCTTTACTCGACACCTCGCTGTAAGGGACTCGCTGTGTTTTTGTATTGGGAATGTCCACTGTTAACACGGACGGCCGTCCCGGCCTGTCCTCTGGTTCAACAGCAGCAGTACTGCAGCGTCTCCGTTCCCTCCCAACCCGTTCCACGACCCCCTGTCTTCCATCACCCCCACCCTCTTCTCCGAGGTGGAGCGCTCCATCGACGAGGAACTCCTCCTGATGGAGCTGTGTGAGGAAGACTCTGAGGAGGGGCGAGAGGATCCTGACCCTGTCAAAGATGATCTGTACGCTCGGCGGTTGGAACTGGCCCTCCACCAGACGACCTCCAACCCTGGCTACAACCGCTTCCTGCCCCGCTATTGGACTCCCGAGGAGGAGGTGCACGTCAGGACCATCAGGCTGGGCTCTCAGAGGAGACCCTGGTACCACAAGATGTACAGATTGAGCCGAAAGACAACAGGTTCCTCAGGATGATTCAGGCTGTGACATCACTCCTTGGCTCGTTGTTCCTGTCTTGTCTGCACCCCCTCCCTCCAGCCACCCCCATCCTGACTTTACCTTCACCCCTGTATCCCAGTTCAGTGCTTTGTGCAACTGAAAATGAACTATTTCCAAAGGAGTAGATTTTAAACTAGGCTTGTGTGGTATCCAGATTGTCATGTCTTCATACCGACCTTGATCCATCCTGAGATATTCAGTAATACCGGCACTGAACACAAGGGCTGCCATTTTTAAACTCCACTGAGCCTCTGTAATccgaaggttagcaatgctaacaactacatgtaaaatcccatagagaatgctaacGGACGCATTGCAAAAATTTGTATTGTCTCAGACTTAATCGATTTGCTGGACAGACATCCCAACTATTGAAGTTCTacaagtaatttaaaaaaaatgcttctCACTTTGCTGCACGCACAAAGCAAATATTAGACTGCAaggatcttgatccaggaggggattttCTGTTATCACGCAAagcttgattttggaagaagctaaccacttagctaggtagctaactagctactaaattagctAACCACTTAGccaggtagctaactagctactaaattagcta

Function

NR:

description
LIM domain only protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972368.1 True 2016 mRNA 0.49 2 1392363 1395554

Neighbor

gene id symbol gene type direction distance location
LOC118947132 NA coding upstream 37948 1353782 ~ 1354415 (+)
klf5a LOC106593200 coding upstream 58969 1305991 ~ 1333394 (+)
pibf1 pibf1 coding upstream 91081 1216077 ~ 1301282 (+)
blzf1 LOC106575890 coding upstream 183689 1202037 ~ 1209051 (+)
tpp2 tpp2 coding upstream 346065 979593 ~ 1046298 (+)
G2340219 NA non-coding upstream 30775 1360493 ~ 1361588 (+)
G2340222 NA non-coding upstream 34775 1357152 ~ 1357588 (+)
G2340213 NA non-coding upstream 53025 1339130 ~ 1339338 (+)
G2340154 NA non-coding upstream 53398 1336901 ~ 1338965 (+)
G2340118 NA other upstream 273394 1116943 ~ 1118969 (+)
G2339955 NA other upstream 419580 972479 ~ 972783 (+)
G2339912 NA other upstream 518524 870947 ~ 900840 (+)

Expression


Co-expression Network