G2339371


Basic Information

Item Value
gene id G2339371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 160850 ~ 161758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678342
Acagacccaacacaacacaacacagacccaacacagcacagacccaacacaacacaacacagacccaacacaacacagacccaacacagcacagacccaacacagcacagacccaacacaacacaacacagacccaacacagcacaaacccaacacaacacagacccaacacagcacagacccaacacagacccaacacagcacagacccaacacagcacagacccaacacaacacagacccaacacagacccaacacaacacagacccaacacagcacagacccaacacagcacagacccaacacaacacagacccaacaaagacccaacacaacacagacccaacacagcacagacccaacacagacccaacacagacccaacacaacacagacccaacacagcacagacccaacacaacacagacccaacacaacacagacccaacacagacccaacacagcacagacccaacacaacacagacccaacacagacccaacacaacacagacccaacacaacacagacccaacacaacacagac
>TU2678343
AcagacccaacacaacacaacacagacccaacacagcacagacccaacacaacacaacacagacccaacacaacacagacccaacacagcacagacccaacacagcacagacccaacacaacacaacacagacccaacacagcacaaacccaacacaacacagacccaacacagcacagacccaaCACAGCACAGACCTAACACAGTACAGACCCAACAC

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678342 False 546 lncRNA 0.52 4 160850 161758
TU2678343 True 220 lncRNA 0.51 3 160850 161385

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding downstream 433745 595503 ~ 596337 (+)
LOC110495334 LOC106575937 coding downstream 600821 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 649729 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 783694 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 817835 979593 ~ 1046298 (+)
G2339358 NA non-coding upstream 29169 127299 ~ 131681 (+)
G2339356 NA non-coding upstream 39530 120569 ~ 121320 (+)
G2339352 NA non-coding upstream 45696 112078 ~ 115154 (+)
G2339344 NA non-coding upstream 61358 98520 ~ 99492 (+)
G2339339 NA non-coding upstream 75455 85065 ~ 85395 (+)
G2339376 NA non-coding downstream 7281 169039 ~ 173822 (+)
G2339395 NA non-coding downstream 41207 202965 ~ 204267 (+)
G2339424 NA non-coding downstream 120994 282752 ~ 283539 (+)
G2339427 NA non-coding downstream 128004 289762 ~ 290111 (+)
G2339348 NA non-coding downstream 146694 308452 ~ 308783 (+)
G2339343 NA other upstream 62994 97115 ~ 97856 (+)
G2339478 NA other downstream 301440 463198 ~ 464467 (+)
G2339795 NA other downstream 521586 683344 ~ 685548 (+)
G2339912 NA other downstream 709349 870947 ~ 900840 (+)
G2339955 NA other downstream 810721 972479 ~ 972783 (+)
G2340118 NA other downstream 955185 1116943 ~ 1118969 (+)

Expression


Co-expression Network