G2339488


Basic Information

Item Value
gene id G2339488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 485453 ~ 485746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678491
AAACACGGCCTAACCAATAGGAACCAGGAAACATGACCTAACTAATAGGAACCAGGAAACATGGCCTAACCAATAGGAACCAGGAAACACGGCCTAACCAATAGGAACCAGGAAACACGACCTAACCAATAGGAACCAGGAAACACGACCTAAACAATAGGAACCAGGAAACACGACCTAACCAATAGGAACCAGGAAACACGGCCTAACCAATAGGAACCAGGAAACACGGCCTAACCAATAGGAACCAGGAAACATGAACCAACAGTGGACCATGACAGACATACAGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678491 True 294 lncRNA 0.46 1 485453 485746

Neighbor

gene id symbol gene type direction distance location
LOC118947131 LOC103365236 coding upstream 180212 107069 ~ 305241 (+)
LOC118947129 NA coding downstream 109757 595503 ~ 596337 (+)
LOC110495334 LOC106575937 coding downstream 276833 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 325741 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 459706 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 493847 979593 ~ 1046298 (+)
G2339482 NA non-coding upstream 16669 468486 ~ 468784 (+)
G2339481 NA non-coding upstream 20700 464536 ~ 464753 (+)
G2339475 NA non-coding upstream 36957 448264 ~ 448496 (+)
G2339474 NA non-coding upstream 40808 444306 ~ 444645 (+)
G2339473 NA non-coding upstream 42374 442811 ~ 443079 (+)
G2339489 NA non-coding downstream 45 485791 ~ 486026 (+)
G2339512 NA non-coding downstream 60594 546340 ~ 546933 (+)
G2339517 NA non-coding downstream 67067 552813 ~ 553443 (+)
G2339518 NA non-coding downstream 68490 554236 ~ 554911 (+)
G2339522 NA non-coding downstream 86961 572707 ~ 588552 (+)
G2339478 NA other upstream 20986 463198 ~ 464467 (+)
G2339343 NA other upstream 387597 97115 ~ 97856 (+)
G2339795 NA other downstream 197598 683344 ~ 685548 (+)
G2339912 NA other downstream 385361 870947 ~ 900840 (+)
G2339955 NA other downstream 486733 972479 ~ 972783 (+)
G2340118 NA other downstream 631197 1116943 ~ 1118969 (+)
blzf1 LOC106575890 other downstream 721512 1202037 ~ 1209051 (+)

Expression


Co-expression Network