Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339489 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493665.1 |
| NCBI id | JAAXML020000242.1 |
| chromosome length | 1484196 |
| location | 485791 ~ 486026 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| splicing factor U2af large subunit A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2678492 | True | 236 | lncRNA | 0.39 | 1 | 485791 | 486026 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118947131 | LOC103365236 | coding | upstream | 180550 | 107069 ~ 305241 (+) |
| LOC118947129 | NA | coding | downstream | 109477 | 595503 ~ 596337 (+) |
| LOC110495334 | LOC106575937 | coding | downstream | 276553 | 762579 ~ 768787 (+) |
| si:ch73-41e3.7 | NA | coding | downstream | 325461 | 811487 ~ 817841 (+) |
| LOC118947137 | NA | coding | downstream | 459426 | 945293 ~ 946912 (+) |
| tpp2 | tpp2 | coding | downstream | 493567 | 979593 ~ 1046298 (+) |
| G2339488 | NA | non-coding | upstream | 45 | 485453 ~ 485746 (+) |
| G2339482 | NA | non-coding | upstream | 17007 | 468486 ~ 468784 (+) |
| G2339481 | NA | non-coding | upstream | 21038 | 464536 ~ 464753 (+) |
| G2339475 | NA | non-coding | upstream | 37295 | 448264 ~ 448496 (+) |
| G2339474 | NA | non-coding | upstream | 41146 | 444306 ~ 444645 (+) |
| G2339512 | NA | non-coding | downstream | 60314 | 546340 ~ 546933 (+) |
| G2339517 | NA | non-coding | downstream | 66787 | 552813 ~ 553443 (+) |
| G2339518 | NA | non-coding | downstream | 68210 | 554236 ~ 554911 (+) |
| G2339522 | NA | non-coding | downstream | 86681 | 572707 ~ 588552 (+) |
| G2339532 | NA | non-coding | downstream | 122310 | 608336 ~ 610581 (+) |
| G2339478 | NA | other | upstream | 21324 | 463198 ~ 464467 (+) |
| G2339343 | NA | other | upstream | 387935 | 97115 ~ 97856 (+) |
| G2339795 | NA | other | downstream | 197318 | 683344 ~ 685548 (+) |
| G2339912 | NA | other | downstream | 385081 | 870947 ~ 900840 (+) |
| G2339955 | NA | other | downstream | 486453 | 972479 ~ 972783 (+) |
| G2340118 | NA | other | downstream | 630917 | 1116943 ~ 1118969 (+) |
| blzf1 | LOC106575890 | other | downstream | 721232 | 1202037 ~ 1209051 (+) |
