G2339517


Basic Information

Item Value
gene id G2339517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 552813 ~ 553443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678524
GTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGACTATTAATGAACGACtcaacagcagtagacaaggttGTTCTGTCTCTGAGGACTATAATGCTGAATGTTGTGGTGATACCAGTCTGACTATTAATGAACGACtcaacagcagtagacaaggttGTTCTGTCTCTGAGGACTATAATGCGGAATGTTGTGGTGATACCAGTC
>TU2678525
GTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGACTATTAATGAACGACtcaacagcagtagacaagGTTGTTCTGTCTCTGAGGACTATGATGCTGAATGTTGTGGTGATACCAGTCTGTCTATTAATGAACGACtcaacagcagtagacaaggttGTTCTGTCTCTGAGGACTATGATGTTAATGTATAGAGTAATACAGGCTGATCAGGCCCGGTCCAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678524 False 349 lncRNA 0.44 2 552813 553205
TU2678525 True 369 lncRNA 0.44 2 552813 553443

Neighbor

gene id symbol gene type direction distance location
LOC118947131 LOC103365236 coding upstream 247572 107069 ~ 305241 (+)
LOC118947129 NA coding downstream 42060 595503 ~ 596337 (+)
LOC110495334 LOC106575937 coding downstream 209136 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 258044 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 392009 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 426150 979593 ~ 1046298 (+)
G2339512 NA non-coding upstream 5880 546340 ~ 546933 (+)
G2339489 NA non-coding upstream 66787 485791 ~ 486026 (+)
G2339488 NA non-coding upstream 67067 485453 ~ 485746 (+)
G2339482 NA non-coding upstream 84029 468486 ~ 468784 (+)
G2339481 NA non-coding upstream 88060 464536 ~ 464753 (+)
G2339518 NA non-coding downstream 793 554236 ~ 554911 (+)
G2339522 NA non-coding downstream 19264 572707 ~ 588552 (+)
G2339532 NA non-coding downstream 54893 608336 ~ 610581 (+)
G2339547 NA non-coding downstream 102038 655481 ~ 657445 (+)
G2339548 NA non-coding downstream 104359 657802 ~ 658162 (+)
G2339478 NA other upstream 88346 463198 ~ 464467 (+)
G2339343 NA other upstream 454957 97115 ~ 97856 (+)
G2339795 NA other downstream 129901 683344 ~ 685548 (+)
G2339912 NA other downstream 317664 870947 ~ 900840 (+)
G2339955 NA other downstream 419036 972479 ~ 972783 (+)
G2340118 NA other downstream 563500 1116943 ~ 1118969 (+)
blzf1 LOC106575890 other downstream 653815 1202037 ~ 1209051 (+)

Expression


Co-expression Network