G2339522


Basic Information

Item Value
gene id G2339522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 572707 ~ 588552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678531
ggaagaccagagaggtagaggaagaccagagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagacccgAGGTAGAGGAAGatcagaggtagaggaagaccataGgtagaggaagaagagaggtagCGGAAGAAGAGAGGTAGCGGaagaccagagagatagaggaagaccagagaggtagagggagaccagagaggtagaggaagaccagagaagtagaggaagaccagagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagacaagagaggtagaggaagaccagagaggtagaggaagaccagagaggtc
>TU2678532
ggaagaccagagaggtagaggaagaccagagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagacccgAGGTAGAGGAAGatcagaggtagaggaagacccgAGGTAGAGGAAGatcagaggtagaggaagaccataggtagaggaagaagagaggtagCGGAAGAAGAGAGGTAGCGGaagaccagagagatagaggaagaccagagaggtagagggagaccagagaggtagaggaagaccagagaagtagaggaagaccagagaggtagaggaagaccagaggtagaggaagaccagaggtagaggaagaccagagaggtagaggaagaccagagaggtagaggaagacaagagaggtagagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678531 False 453 lncRNA 0.52 4 572707 588552
TU2678532 True 454 lncRNA 0.52 4 572707 585134

Neighbor

gene id symbol gene type direction distance location
LOC118947131 LOC103365236 coding upstream 267466 107069 ~ 305241 (+)
LOC118947129 NA coding downstream 6951 595503 ~ 596337 (+)
LOC110495334 LOC106575937 coding downstream 174027 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 222935 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 356900 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 391041 979593 ~ 1046298 (+)
G2339518 NA non-coding upstream 17796 554236 ~ 554911 (+)
G2339517 NA non-coding upstream 19264 552813 ~ 553443 (+)
G2339512 NA non-coding upstream 25774 546340 ~ 546933 (+)
G2339489 NA non-coding upstream 86681 485791 ~ 486026 (+)
G2339488 NA non-coding upstream 86961 485453 ~ 485746 (+)
G2339532 NA non-coding downstream 19784 608336 ~ 610581 (+)
G2339547 NA non-coding downstream 66929 655481 ~ 657445 (+)
G2339548 NA non-coding downstream 69250 657802 ~ 658162 (+)
G2339554 NA non-coding downstream 87284 675836 ~ 676782 (+)
G2339791 NA non-coding downstream 91528 680080 ~ 680537 (+)
G2339478 NA other upstream 108240 463198 ~ 464467 (+)
G2339343 NA other upstream 474851 97115 ~ 97856 (+)
G2339795 NA other downstream 94792 683344 ~ 685548 (+)
G2339912 NA other downstream 282555 870947 ~ 900840 (+)
G2339955 NA other downstream 383927 972479 ~ 972783 (+)
G2340118 NA other downstream 528391 1116943 ~ 1118969 (+)
blzf1 LOC106575890 other downstream 618706 1202037 ~ 1209051 (+)

Expression


Co-expression Network