G2339548


Basic Information

Item Value
gene id G2339548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 657802 ~ 658162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678578
gctaccagcccacctatgagtagctcaCAATACTATTCTGAAAGGTTACACCATACACCAGGGGTCTCCagcaggctagggttaggggttaaggttagggttagggttaagggttagggttagctaccaGCTGGTTAAAAAGACAAACCTAACACAACATCATCCCACCCCTGGTCAGCCACTATTGGTTAAAAAGACAAACCTAACACAACATCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678578 True 219 lncRNA 0.47 2 657802 658162

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding upstream 61465 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 352561 107069 ~ 305241 (+)
LOC110495334 LOC106575937 coding downstream 104417 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 153325 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 287290 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 321431 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 543875 1202037 ~ 1209051 (+)
G2339547 NA non-coding upstream 357 655481 ~ 657445 (+)
G2339532 NA non-coding upstream 47221 608336 ~ 610581 (+)
G2339522 NA non-coding upstream 69250 572707 ~ 588552 (+)
G2339518 NA non-coding upstream 102891 554236 ~ 554911 (+)
G2339517 NA non-coding upstream 104359 552813 ~ 553443 (+)
G2339554 NA non-coding downstream 17674 675836 ~ 676782 (+)
G2339791 NA non-coding downstream 21918 680080 ~ 680537 (+)
G2339793 NA non-coding downstream 22792 680954 ~ 682170 (+)
G2339801 NA non-coding downstream 35680 693842 ~ 694184 (+)
G2339815 NA non-coding downstream 45774 703936 ~ 704424 (+)
G2339478 NA other upstream 193335 463198 ~ 464467 (+)
G2339343 NA other upstream 559946 97115 ~ 97856 (+)
G2339795 NA other downstream 25182 683344 ~ 685548 (+)
G2339912 NA other downstream 212945 870947 ~ 900840 (+)
G2339955 NA other downstream 314317 972479 ~ 972783 (+)
G2340118 NA other downstream 458781 1116943 ~ 1118969 (+)

Expression


Co-expression Network