G2339554


Basic Information

Item Value
gene id G2339554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 675836 ~ 676782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678586
CCATACATCTACAGAATACAGGCTACGGCAGTGTGCCATACATCTACAGAATACAGGCTACGGCAGTTTGCCATACATCTACAGAATACAGGCTACGGCAGTTTGCCATACATCTACAGAATACAGGCTACGGCAGTGTGCCATACATCTACAGAATACAGGCTACGGCAGTTTGCCATACATCTACAGAATACAGGCTACGGCAGTTTGCCATGGTTCAACAAACCCAGTCATGTATGATTGCACTACTTTGGTAACCCTGATATAGAAATGGTGAAGAAACGTGCAGATATACTGATCCATTTATAATGTATACAACTACCGTAGCCTGCCTAccttctctcggtctctcgggTAGGGATTTCACTGGTCCAATCTGCCGCAGCTGAAAAACTTTGCGCACTTCATCACAGCTCGTTAGACTTCCCGAAATCAGCCCGACACAAGcagcaacaaacaaacaacacagcATCTTTTGTAGCCCCATTTTCAAATCGAGGTTGATGTTACTCAAAAACCCCTATCTAATATTAAAGTTATTGACATTCCTGACAGACCGCCATTCCTTCGATCACAACATCCACATTTTCAAGGTTCAGGGATCTGCGACGGTACTTTTCAATGACGGAAAACAATTGCCTTGAAATGTTCTAAAAAACAATCAAATCCTGAATGAAGTTACAAGTCGTTGAAAGAGTCATGGGACTGTAGCAGAACTCAACCGCAGCATGTTGAGCAACTTGGCGTGACTGGAGCCGTCA

Function

NR:

description
glypican-5-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678586 True 761 lncRNA 0.44 2 675836 676782

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding upstream 79499 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 370595 107069 ~ 305241 (+)
LOC110495334 LOC106575937 coding downstream 85797 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 134705 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 268670 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 302811 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 525255 1202037 ~ 1209051 (+)
G2339548 NA non-coding upstream 17674 657802 ~ 658162 (+)
G2339547 NA non-coding upstream 18391 655481 ~ 657445 (+)
G2339532 NA non-coding upstream 65255 608336 ~ 610581 (+)
G2339522 NA non-coding upstream 87284 572707 ~ 588552 (+)
G2339518 NA non-coding upstream 120925 554236 ~ 554911 (+)
G2339791 NA non-coding downstream 3298 680080 ~ 680537 (+)
G2339793 NA non-coding downstream 4172 680954 ~ 682170 (+)
G2339801 NA non-coding downstream 17060 693842 ~ 694184 (+)
G2339815 NA non-coding downstream 27154 703936 ~ 704424 (+)
G2339816 NA non-coding downstream 28886 705668 ~ 706110 (+)
G2339478 NA other upstream 211369 463198 ~ 464467 (+)
G2339343 NA other upstream 577980 97115 ~ 97856 (+)
G2339795 NA other downstream 6562 683344 ~ 685548 (+)
G2339912 NA other downstream 194325 870947 ~ 900840 (+)
G2339955 NA other downstream 295697 972479 ~ 972783 (+)
G2340118 NA other downstream 440161 1116943 ~ 1118969 (+)

Expression


Co-expression Network