G2339816


Basic Information

Item Value
gene id G2339816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 705668 ~ 706110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678929
ggttaagggcgctgtactgcagcgccagctgtgccatcagagtccctgggttcgcgcccaggcactgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgtccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggctgggcgcagtgcgcgctagccaaggttgccaggtgcacggtgtagcctctgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtatggctggttgggttgtgtatcggaggatgcatgacattcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaattggataccacgaaattggggagaaaaaggggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678929 True 443 lncRNA 0.60 1 705668 706110

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding upstream 109331 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 400427 107069 ~ 305241 (+)
LOC110495334 LOC106575937 coding downstream 56469 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 105377 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 239342 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 273483 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 495927 1202037 ~ 1209051 (+)
G2339815 NA non-coding upstream 1244 703936 ~ 704424 (+)
G2339801 NA non-coding upstream 11484 693842 ~ 694184 (+)
G2339793 NA non-coding upstream 23498 680954 ~ 682170 (+)
G2339791 NA non-coding upstream 25131 680080 ~ 680537 (+)
G2339554 NA non-coding upstream 28886 675836 ~ 676782 (+)
G2339817 NA non-coding downstream 88 706198 ~ 706486 (+)
G2339823 NA non-coding downstream 3013 709123 ~ 710846 (+)
G2339843 NA non-coding downstream 21210 727320 ~ 727543 (+)
G2339847 NA non-coding downstream 27967 734077 ~ 734278 (+)
G2339848 NA non-coding downstream 28183 734293 ~ 746736 (+)
G2339795 NA other upstream 20120 683344 ~ 685548 (+)
G2339478 NA other upstream 241201 463198 ~ 464467 (+)
G2339343 NA other upstream 607812 97115 ~ 97856 (+)
G2339912 NA other downstream 164997 870947 ~ 900840 (+)
G2339955 NA other downstream 266369 972479 ~ 972783 (+)
G2340118 NA other downstream 410833 1116943 ~ 1118969 (+)
pibf1 pibf1 other downstream 573785 1216077 ~ 1301282 (+)

Expression


Co-expression Network