G2339847


Basic Information

Item Value
gene id G2339847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 734077 ~ 734278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678965
cagaaCAACACAGGGAGAGGCAAGATGGAGACCGGCTCTCTCTGAAGAACACAAACCCAGCACCCAACGCATAAAGAAAAACACTCAATAGTTCCTCCTTTAAGATCCTACGAAGCTCAACTCCGGGCTTGACAGATGTAAAGATTTTAATCTTGAGATTTAACCACGTCCACAGTGTTACAGGAAGAGGCTGCAGACAGAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678965 True 202 lncRNA 0.46 1 734077 734278

Neighbor

gene id symbol gene type direction distance location
LOC118947129 NA coding upstream 137740 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 428836 107069 ~ 305241 (+)
LOC110495334 LOC106575937 coding downstream 28301 762579 ~ 768787 (+)
si:ch73-41e3.7 NA coding downstream 77209 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 211174 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 245315 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 467759 1202037 ~ 1209051 (+)
G2339843 NA non-coding upstream 6534 727320 ~ 727543 (+)
G2339823 NA non-coding upstream 23231 709123 ~ 710846 (+)
G2339817 NA non-coding upstream 27591 706198 ~ 706486 (+)
G2339816 NA non-coding upstream 27967 705668 ~ 706110 (+)
G2339815 NA non-coding upstream 29653 703936 ~ 704424 (+)
G2339848 NA non-coding downstream 15 734293 ~ 746736 (+)
G2339853 NA non-coding downstream 7881 742159 ~ 743553 (+)
G2339858 NA non-coding downstream 17570 751848 ~ 753684 (+)
G2339859 NA non-coding downstream 19670 753948 ~ 755073 (+)
G2339875 NA non-coding downstream 59457 793735 ~ 797599 (+)
G2339795 NA other upstream 48529 683344 ~ 685548 (+)
G2339478 NA other upstream 269610 463198 ~ 464467 (+)
G2339343 NA other upstream 636221 97115 ~ 97856 (+)
G2339912 NA other downstream 136829 870947 ~ 900840 (+)
G2339955 NA other downstream 238201 972479 ~ 972783 (+)
G2340118 NA other downstream 382665 1116943 ~ 1118969 (+)
pibf1 pibf1 other downstream 545617 1216077 ~ 1301282 (+)

Expression


Co-expression Network