G2339875


Basic Information

Item Value
gene id G2339875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 793735 ~ 797599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679007
GTATAGACAGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCATGGAGGATGTTACTCACAGTATAGACAGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCATGGAGGATGTTACTCACAGTATAGACAGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCATGGAGGATGTTACTCACAGTATAGACCGGCCCAGTCAAGAACCATGATGGAGGATGTTACAGTATAGACAGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAAccatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCAtgatggaggatgttacagtatagaCCGGCCCAGTCAAGAACCATGATGGAGGATGTTACTCACAGTATAGACAGTCCCAGTATGTTGTCTAGAGCCGTAATGGAGGACTTGGTCAGCGGTTTCCACTTCTCCTGACCTTTCAGCTTCCGGGGACCTGCAACTGTGccacctttcttcttcttctgtggttttgGCTGAGGGATCTGGCTGCTGGTTCCTGGCTGGGGCTCCTCCTGGAGAGGAGGGTACACGCGGACAGAATGATGTGATGAAAACAAAAAGGAGAACCGTATTCTCTCAGAGGTTTAATTCTTCAGAACTTTCTCACCTGAGATACTCTCCGTTGACGTGTCTTTATACCGGGCTTATTTGGCTTCTCGCCTGTCTTCTTGCCTTTAGGTGTCTTGGATGCGGCGCGTTCAGATCCCCGGACAGGCTTCATAATTTTAACTAGGAAAAAGAGACAACGTCAGACAGACAACTAACTAAATCAAGGCATACATGGGAAAAGTGGGGGGGAAACATAGCCGCTAAATAGATAATGATATGATATACAATCTGAAAGCTAGCAAACATGAGCACT
>TU2679005
AAGCGGCAAGCAGGCCACTCCAGGCGGCCATGATGGAAAGGGCAATGAGGGCACTCCTCATAGAGGATGATAGGGGCCTCTAGTGGCCCAAAAGGACGTATTAGGCAGCGTTCTTCTCCTTAGCACAATTTACAAGTATGGCTCTCTCTGGCCTCTCCATGTTTCCCCAGCCACCATCACTCCCAATCCAAACCCCCTGAAACGGCTTTCTTAATTCAATGCACGTCTTCAAGAGGAAGTGCGTTCCAGGTCCATTCCACTCCTCggtgggcagcgccattgagggcgttcaccattttaaatattaaactgggtgggactttcaacttcattggctgatccctcctggtgaccctTTTGGAGTCTGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTagctatataatataatatactggttAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTagctatataatataatatactggttAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTagctatataatataatatactggttAGATGGGGTTTAGCTATATAATATAATGGTTAGATGGGGTTTGGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGATGGGGTTTAGCTATATAATATACTGGTTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679007 False 1254 lncRNA 0.48 2 793735 796273
TU2679005 True 1070 lncRNA 0.39 1 796530 797599

Neighbor

gene id symbol gene type direction distance location
LOC110495334 LOC106575937 coding upstream 24948 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 197398 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 488494 107069 ~ 305241 (+)
si:ch73-41e3.7 NA coding downstream 13888 811487 ~ 817841 (+)
LOC118947137 NA coding downstream 147853 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 181994 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 404438 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 418478 1216077 ~ 1301282 (+)
G2339859 NA non-coding upstream 38662 753948 ~ 755073 (+)
G2339858 NA non-coding upstream 40051 751848 ~ 753684 (+)
G2339848 NA non-coding upstream 46999 734293 ~ 746736 (+)
G2339853 NA non-coding upstream 50182 742159 ~ 743553 (+)
G2339847 NA non-coding upstream 59457 734077 ~ 734278 (+)
G2339891 pros1 non-coding downstream 27529 825128 ~ 826439 (+)
G2339896 NA non-coding downstream 34206 831805 ~ 832307 (+)
G2339869 pros1 non-coding downstream 37349 834948 ~ 838462 (+)
G2339899 NA non-coding downstream 43907 841506 ~ 843332 (+)
G2339902 NA non-coding downstream 49278 846877 ~ 848091 (+)
G2339795 NA other upstream 108187 683344 ~ 685548 (+)
G2339478 NA other upstream 329268 463198 ~ 464467 (+)
G2339343 NA other upstream 695879 97115 ~ 97856 (+)
G2339912 NA other downstream 73508 870947 ~ 900840 (+)
G2339955 NA other downstream 174880 972479 ~ 972783 (+)
G2340118 NA other downstream 319344 1116943 ~ 1118969 (+)

Expression


Co-expression Network