G2339891 (pros1)


Basic Information

Item Value
gene id G2339891
gene name pros1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 825128 ~ 826439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679023
actcctttcttccctcccttcctctccccctacctccctccctccccctcctcctaatCATTAGGTAGAGGATCATATACACAGATGTGGGCCTCAGGACAGAGATGTGTGGTGATTGGTCGACCTGGCTGTGAGGTCACTTCCTGTAGGgtgagtggtgggggggggggggggggggggtcgtcagAGAGTGTCTTGGGGGGGCGAGACAGGGGGGCAGGAGTGGGACTTAATGCTGTTGTGTTTACTGTCTGCCTCGTCGAAGTCTAACAGTCGATCGTTGACGTTGACGTCCATACAGCCGTGGTAGTAGGCTGTCACTGGGGTGGCGGAGACTGGGACCTCTGGCAGTCCTCCTATACATGTCCTGACAGAGTGTGTCATCATCGTGTTGTTGAGTCGATCCAGCGCCCCGTCAGGGAGGCTGTAGGACCAGGTGGAGGTGTTGGCGACGATCTCCAGGCTAGTGGGGGTGACAGTCAGTCCTACAGACAGACGGTCTGGGTAACACAGCATCAACGACTGCAGCGTTGCCACGGACACTCCATCCAGGAACACCTGC

Function

symbol description
pros1 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within blood coagulation and fibrinolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in hypochord. Human ortholog(s) of this gene implicated in autosomal dominant thrombophilia due to protein S deficiency; autosomal recessive thrombophilia due to protein S deficiency; cerebral infarction; and protein S deficiency. Orthologous to human PROS1 (protein S).

NR:

description
vitamin K-dependent protein S

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679023 True 562 lncRNA 0.58 2 825128 826439

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 7287 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 56341 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 228791 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 519887 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 119013 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 153154 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 375598 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 389638 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 479552 1305991 ~ 1333394 (+)
G2339875 NA non-coding upstream 27529 793735 ~ 797599 (+)
G2339859 NA non-coding upstream 70055 753948 ~ 755073 (+)
G2339858 NA non-coding upstream 71444 751848 ~ 753684 (+)
G2339848 NA non-coding upstream 78392 734293 ~ 746736 (+)
G2339853 NA non-coding upstream 81575 742159 ~ 743553 (+)
G2339896 NA non-coding downstream 5366 831805 ~ 832307 (+)
G2339869 pros1 non-coding downstream 8509 834948 ~ 838462 (+)
G2339899 NA non-coding downstream 15067 841506 ~ 843332 (+)
G2339902 NA non-coding downstream 20438 846877 ~ 848091 (+)
G2339893 NA non-coding downstream 21991 848430 ~ 852521 (+)
G2339795 NA other upstream 139580 683344 ~ 685548 (+)
G2339478 NA other upstream 360661 463198 ~ 464467 (+)
G2339343 NA other upstream 727272 97115 ~ 97856 (+)
G2339912 NA other downstream 44668 870947 ~ 900840 (+)
G2339955 NA other downstream 146040 972479 ~ 972783 (+)
G2340118 NA other downstream 290504 1116943 ~ 1118969 (+)

Expression


Co-expression Network