G2339869 (pros1)


Basic Information

Item Value
gene id G2339869
gene name pros1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 834948 ~ 838462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678998
ATATAACCAGCTAGAGACAGTCATGTTGGACAGGTGACTAATATAACCAGCTAGAGACAGTCATGTTGGACAGAGGACTAATATAACCAGCTAGAGACAGTCAGGTTGGACAGGTGACTAATATAACCAGCTAGAGACAGTCAGGTTGGACAGGTGACTAATATAACCAGCTAGAGACAGTCAGGTTGGACAGAGGACTAATATAACCAGCTATAGACAGTCAGGTTGGACAGAGGACTAATATAACCAGCTAGAGACAGTCAGGTTGGACAGGTGACTAATATAACCAGCTAGAGACAGTAAGGTTGGACAGGTGACTAATATAACCAGCTAGAGACAGTAAAAGACAGGCAGTCAGGTTGGACAGATGACTAATATAACCAGCTAGAGACAGTAAAACGTAATCAGTGATGTAATCCACGAGCCAGTCTTACCACATGCCACTGTCCGTCGTTGATGGCCTTGCCCCCGCTGGTGACCTTCAGGGAGTGCTGGGTCTTGAACTGGACCTCgatccgtcctcccctcagccccAGCATGAACCACGAGTCCTGGGAAGACTCTGCGTACAGAACCACCCCTTCTGGATCAAACGTCCGGAAGTCAAACTCTGCAGCAAACCTGGAGACACACGACCCAGACGACCCAGACGATTTAGGGTACAGTTgtgtagtcaaatcaaatcaaatgtatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagagtGAACAGGACTGCATGTCTGTCTCTGCCTCGGTGTGTTTAAACCCCCTTACTTGGTGTTCTCCGGTAGTCTGAAGCGGAGGTATATGACAGGCCCTCCGGTGAATTGTTCTCCCAGGTACAGCATCTCAGGGTGTTTGTAGTCGTAGAGCTGGACACACACCGGCACCTCCTCGCAAGAACGCTGGTCCTCCGCTAACCGCAGGCCCTGACGACCTTCGCAGCGGCAGGAGTAGCTACCCATCGTGTTCACACACACGCCCTCACACACGCCCACCTCGCACTCGTCGACATCTGGGGACAATCACGAGCGTCAGGCGGAGAgggtagaggtcagaggtcattacaggaggtacagggtcagggttaagaTCAGTTGATACCAAAAGTTCCATTAGGTccttggtagcctagtggttagagtgtagaggaggcaggtagtctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtaacctagtggttagagtgtagaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggcggcaggtagtctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtaacctagtggttagagtgtagaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtaacctagtggttagagtgtagaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtaacctagtggttagagtgtagaggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttacagagttgggccagtaaccaaaaggttcctagatcgaatccctgagctgacaaggtaaaaatctgaccTTCTGcaactgaacaaggcagttaacccactgttcctagaccagttaacccactgttcctagaccagttaacccactgttcctagactagttaacccactgttcctagaccagttaacccactgttcctagggccgtcattgtaaataagaacttgttcatAACTGACCTGACTAGTTAAATTAACATGTTCCTGTCTGTGATAGTGTCTTTCTCATGTGGTCAGTGTAGGTACAGTGGAGTGGCATCTCACCCAAACAGGAACGCAAGGTGAAGTTGTAACTGAAGCCCGGGGGACACTGGCACTCATACATGCCAGGGTTGTTGACACATTTAGCCGGTTCTTCACAGATACTGGGGTACAGCAGACACTCATTGATATCTGGGGAGGGAACACATTTAGCTGGTTCCTCAGAGATATTGGGGTACAGCAGACACTCTCTGG

Function

symbol description
pros1 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within blood coagulation and fibrinolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in hypochord. Human ortholog(s) of this gene implicated in autosomal dominant thrombophilia due to protein S deficiency; autosomal recessive thrombophilia due to protein S deficiency; cerebral infarction; and protein S deficiency. Orthologous to human PROS1 (protein S).

NR:

description
vitamin K-dependent protein S

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678998 True 2571 lncRNA 0.50 4 834948 838462

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 17107 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 66161 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 238611 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 529707 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 106990 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 141131 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 363575 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 377615 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 467529 1305991 ~ 1333394 (+)
G2339896 NA non-coding upstream 2641 831805 ~ 832307 (+)
G2339891 pros1 non-coding upstream 8509 825128 ~ 826439 (+)
G2339875 NA non-coding upstream 37349 793735 ~ 797599 (+)
G2339859 NA non-coding upstream 79875 753948 ~ 755073 (+)
G2339858 NA non-coding upstream 81264 751848 ~ 753684 (+)
G2339899 NA non-coding downstream 3044 841506 ~ 843332 (+)
G2339902 NA non-coding downstream 8415 846877 ~ 848091 (+)
G2339893 NA non-coding downstream 9968 848430 ~ 852521 (+)
G2339892 NA non-coding downstream 14391 852853 ~ 857330 (+)
G2339909 NA non-coding downstream 26316 864778 ~ 867417 (+)
G2339795 NA other upstream 149400 683344 ~ 685548 (+)
G2339478 NA other upstream 370481 463198 ~ 464467 (+)
G2339343 NA other upstream 737092 97115 ~ 97856 (+)
G2339912 NA other downstream 32645 870947 ~ 900840 (+)
G2339955 NA other downstream 134017 972479 ~ 972783 (+)
G2340118 NA other downstream 278481 1116943 ~ 1118969 (+)

Expression


Co-expression Network