G2339899


Basic Information

Item Value
gene id G2339899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 841506 ~ 843332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679032
cagtaagtgttacctgtacagtggatctatataactgtaactgttacctgtacagtggatctatataactgttacctgtacagtggatctatataacagtaattgttacctgtacagtggatctatataacagtaactgttacctgtacagtggatctatataactgttacctgtacagtggatctatataactgttacctgtacagtggatctatataacagtaactgttacctgtacagtggatctatataactgtttcctgtacagtggatctatataacagtaagtgttacctgtacagtggatctatataacTGTTACCTGTACAGTGTATCTATATAACAGTAAGTGTTACCTGTACAGTGTATCTATATAACAGTAAgtgttacctgtacagtggatctatataacagtaattgttacctgtacagtggatctatataacAGTAAGTG
>TU2679033
cagtaagtgttacctgtacagtggatctatataactgtaactgttacctgtacagtggatctatataactgttacctgtacagtggatctatataacagtaattgttacctgtacagtggatctatataacagtaactgttacctgtacagtggatctatataactgttacctgtacagtggatctatataacagtaagtgttacctgtacagtggatctatataacTGTTACCTGTACAGTGTATCTATAtaattgttacctgtacagtggatctatataacagtaactattacctgtacagtggatctatataac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679032 False 455 lncRNA 0.35 2 841506 843332
TU2679033 True 317 lncRNA 0.34 2 841506 842550

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 23665 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 72719 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 245169 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 536265 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 102120 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 136261 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 358705 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 372745 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 462659 1305991 ~ 1333394 (+)
G2339869 pros1 non-coding upstream 3044 834948 ~ 838462 (+)
G2339896 NA non-coding upstream 9199 831805 ~ 832307 (+)
G2339891 pros1 non-coding upstream 15067 825128 ~ 826439 (+)
G2339875 NA non-coding upstream 43907 793735 ~ 797599 (+)
G2339859 NA non-coding upstream 86433 753948 ~ 755073 (+)
G2339902 NA non-coding downstream 3545 846877 ~ 848091 (+)
G2339893 NA non-coding downstream 5098 848430 ~ 852521 (+)
G2339892 NA non-coding downstream 9521 852853 ~ 857330 (+)
G2339909 NA non-coding downstream 21446 864778 ~ 867417 (+)
G2339917 NA non-coding downstream 27262 870594 ~ 870928 (+)
G2339795 NA other upstream 155958 683344 ~ 685548 (+)
G2339478 NA other upstream 377039 463198 ~ 464467 (+)
G2339343 NA other upstream 743650 97115 ~ 97856 (+)
G2339912 NA other downstream 27775 870947 ~ 900840 (+)
G2339955 NA other downstream 129147 972479 ~ 972783 (+)
G2340118 NA other downstream 273611 1116943 ~ 1118969 (+)

Expression


Co-expression Network