G2339909


Basic Information

Item Value
gene id G2339909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 864778 ~ 867417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679044
tttagatcctgtatgaagaggtttcagatgtttagatcctgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcaggtgtttagatactgtatgaagaggaagggtttcagatgtttagataccgtatgaagaggtttcagatgtttgatactgtatgaagaggtttcagatgtttagatactgtatgaaga
>TU2679045
ctgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagatcctgtatgaagaggaagggtttcagatgtttagatactgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagataccgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagatactgtatgaagaggtttcagatgtttagataccgtatgaaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679044 False 233 lncRNA 0.35 2 864778 867417
TU2679045 True 286 lncRNA 0.35 2 865060 867144

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 46937 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 95991 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 268441 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 559537 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 78035 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 112176 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 334620 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 348660 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 438574 1305991 ~ 1333394 (+)
G2339892 NA non-coding upstream 7448 852853 ~ 857330 (+)
G2339893 NA non-coding upstream 12257 848430 ~ 852521 (+)
G2339902 NA non-coding upstream 16687 846877 ~ 848091 (+)
G2339899 NA non-coding upstream 21446 841506 ~ 843332 (+)
G2339869 pros1 non-coding upstream 26316 834948 ~ 838462 (+)
G2339917 NA non-coding downstream 3177 870594 ~ 870928 (+)
G2339912 NA non-coding downstream 3530 870947 ~ 900840 (+)
G2339920 NA non-coding downstream 12276 879693 ~ 880261 (+)
G2339925 NA non-coding downstream 21171 888588 ~ 889226 (+)
G2339911 NA non-coding downstream 23823 891240 ~ 893127 (+)
G2339795 NA other upstream 179230 683344 ~ 685548 (+)
G2339478 NA other upstream 400311 463198 ~ 464467 (+)
G2339343 NA other upstream 766922 97115 ~ 97856 (+)
G2339955 NA other downstream 105062 972479 ~ 972783 (+)
G2340118 NA other downstream 249526 1116943 ~ 1118969 (+)

Expression


Co-expression Network