G2339917


Basic Information

Item Value
gene id G2339917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 870594 ~ 870928 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679079
tcccctgtaattattccccaggtcattgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattccccaggtcgttgtctaatcattcctcctctcccctgtaactattcccca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106585997 isoform X12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679079 True 335 lncRNA 0.48 1 870594 870928

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 52753 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 101807 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 274257 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 565353 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 74524 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 108665 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 331109 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 345149 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 435063 1305991 ~ 1333394 (+)
G2339909 NA non-coding upstream 3177 864778 ~ 867417 (+)
G2339892 NA non-coding upstream 13264 852853 ~ 857330 (+)
G2339893 NA non-coding upstream 18073 848430 ~ 852521 (+)
G2339902 NA non-coding upstream 22503 846877 ~ 848091 (+)
G2339899 NA non-coding upstream 27262 841506 ~ 843332 (+)
G2339912 NA non-coding downstream 19 870947 ~ 900840 (+)
G2339920 NA non-coding downstream 8765 879693 ~ 880261 (+)
G2339925 NA non-coding downstream 17660 888588 ~ 889226 (+)
G2339911 NA non-coding downstream 20312 891240 ~ 893127 (+)
G2339913 NA non-coding downstream 27407 898335 ~ 899182 (+)
G2339795 NA other upstream 185046 683344 ~ 685548 (+)
G2339478 NA other upstream 406127 463198 ~ 464467 (+)
G2339343 NA other upstream 772738 97115 ~ 97856 (+)
G2339955 NA other downstream 101551 972479 ~ 972783 (+)
G2340118 NA other downstream 246015 1116943 ~ 1118969 (+)

Expression


Co-expression Network