G2339920


Basic Information

Item Value
gene id G2339920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 879693 ~ 880261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679084
AAATAGATCTACAGTCAATACTATCTAGAGTCTGGACTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACCGCTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGACTGCTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGACCGCTAAGCTGTTTAGGATCATAACGTCAATTAATACCCTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTAGTGTTTGGTAGTTAGTGTTTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTGGTGTTTGGTAGTTGGT
>TU2679085
AAATAGATCTACAGTCAATACTATCTAGAGTCTGGACTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGACTGCTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGACCGCTAAGCTGTTTAGGATCATAACGTCAATTAATACCCTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTAGTGTTTGGTAGTTAGTGTTTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTGGTGTTTGGTAGTTGGT
>TU2679086
AAATAGATCTACAGTCAATACTATCTAGAGTCTGGACTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACCGCTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGATCACTAAGTTGTTTAGACTCATAACAGTCAATACTATCTAGAGTCTGGACTCTGGACCGCTAAGCTGTTTAGGATCATAACGTCAATTAATACCCTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTAGTGTTTGGTAGTTAGTGTTTGGTAGTTGGTGTTTGGCAGTTGGTGTTTGGCAGTTGGTGTTTGGTAGTTGGTGTTTGGTAGTTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679084 False 464 lncRNA 0.39 2 879693 880261
TU2679085 False 415 lncRNA 0.39 2 879693 880261
TU2679086 True 415 lncRNA 0.40 3 879693 880261

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 61852 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 110906 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 283356 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 574452 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 65191 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 99332 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 321776 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 335816 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 425730 1305991 ~ 1333394 (+)
G2339917 NA non-coding upstream 8765 870594 ~ 870928 (+)
G2339909 NA non-coding upstream 12276 864778 ~ 867417 (+)
G2339892 NA non-coding upstream 22363 852853 ~ 857330 (+)
G2339893 NA non-coding upstream 27172 848430 ~ 852521 (+)
G2339902 NA non-coding upstream 31602 846877 ~ 848091 (+)
G2339925 NA non-coding downstream 8327 888588 ~ 889226 (+)
G2339911 NA non-coding downstream 10979 891240 ~ 893127 (+)
G2339913 NA non-coding downstream 18074 898335 ~ 899182 (+)
G2339926 NA non-coding downstream 22332 902593 ~ 904836 (+)
G2339933 NA non-coding downstream 31542 911803 ~ 912256 (+)
G2339912 NA other upstream 5854 870947 ~ 900840 (+)
G2339795 NA other upstream 194145 683344 ~ 685548 (+)
G2339478 NA other upstream 415226 463198 ~ 464467 (+)
G2339343 NA other upstream 781837 97115 ~ 97856 (+)
G2339955 NA other downstream 92218 972479 ~ 972783 (+)
G2340118 NA other downstream 236682 1116943 ~ 1118969 (+)

Expression


Co-expression Network