G2339911


Basic Information

Item Value
gene id G2339911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 891240 ~ 893127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679047
cacaacatactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgttaacaacaatgtactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgtgacccacaacacactaacacactgttaaccacaacatactaacacactgtgacccacaacatactaacacactaccGACacacaacatactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgtgacccacaacatactaacacactgttaaccacaacatactaacacactgtgacccacaacatactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgtgacccacaacatactaacacactgttaaCCACAACATACTAACACATTGTGAcccacaacacactaacacactgttaaccacaacatactaacacactgtgacccacaacatactaacacactgtgacccacaacatactaacacactgtgacacacaacatactaacacactgtgacacacaacatactaacacactgtgacccacaacatactaacacactgtgacccacaacacactaacacactgtgacccacaacatactaacacactgtgacccacaacacactaacacactgtgacccacaacatactaacacactgtgacccacaacatactaacacactgtgacccacaacatactaacacactgtgacccacaacatactaacacactgttaaccacaatacactaacacactgtgacccacaacatactaacacactgtgaCCCACAATACACTAACACACTGTGACccacaacatactaacacactgtgacccacaacatactaacacactgtgaccaacaacatactaacacactgttaaccacaacatactaacacactgttaaccacaacatactaacacactgttagCCACAATACACTAACACACTGTGACccacaacatactaacacactgtgaCCCACAATACACTAACACACTGTGACCaacaacatactaacacactgttaaccacaacattctaacacactgttaaccacaacatactaacacactgttacccacaacacactaacacactgttaaccacaacatactaacacactgttacccacaacacactaacacactgttaaccacaacatactaacacactgtgaCCCACAGCAGGGTGAATTCTGTATTAAACACTGTGACCCACAGCAGGGTGAATTCTGTATGAAACACTGTGACCCACAGCAGGGTGAATTCTGTATGAAACACTGTGACCCACAGCAGGGTGAATTCTGTATTAAACACTGTGACCCACAGCAGGGTGAATTCTGTATGAAACACTCAAGGAGCTAGACGTTTGTTCTCACTGGGTGATGCGGTCGCAGCTGGAACAGGTTGGGAGAGAGGATGGCCGGGGCGAAGAATCGCAGGAAGATGAAACTACTGACCGCTGTGTACCTCACATCCTGGTCGactacagaaacacagagaggggATGTTAGCACAGTGCAGCAGGGGGCAGTGCAGCCTATCATACTAGAGTTTCCACCTACTGGAGAAGAAAAACCTAATGATAAAGACAGGAAGTAAACAGGAAATAAGTCTTTAACAACATCACAGAGactagagggacagagagacagagaga

Function

NR:

description
PREDICTED: ras GTPase-activating protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679047 True 1781 lncRNA 0.43 2 891240 893127

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 73399 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 122453 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 294903 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 585999 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 52325 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 86466 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 308910 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 322950 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 412864 1305991 ~ 1333394 (+)
G2339925 NA non-coding upstream 2014 888588 ~ 889226 (+)
G2339920 NA non-coding upstream 10979 879693 ~ 880261 (+)
G2339917 NA non-coding upstream 20312 870594 ~ 870928 (+)
G2339909 NA non-coding upstream 23823 864778 ~ 867417 (+)
G2339892 NA non-coding upstream 33910 852853 ~ 857330 (+)
G2339913 NA non-coding downstream 5208 898335 ~ 899182 (+)
G2339926 NA non-coding downstream 9466 902593 ~ 904836 (+)
G2339933 NA non-coding downstream 18676 911803 ~ 912256 (+)
G2339940 NA non-coding downstream 38004 931131 ~ 931995 (+)
G2339912 NA other upstream 17401 870947 ~ 900840 (+)
G2339795 NA other upstream 205692 683344 ~ 685548 (+)
G2339478 NA other upstream 426773 463198 ~ 464467 (+)
G2339343 NA other upstream 793384 97115 ~ 97856 (+)
G2339955 NA other downstream 79352 972479 ~ 972783 (+)
G2340118 NA other downstream 223816 1116943 ~ 1118969 (+)

Expression


Co-expression Network