G2339940


Basic Information

Item Value
gene id G2339940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 931131 ~ 931995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679120
CTGTATTACAGACCCCTGAGATTACCTTTATTACAGACCACTGAGATTACCTGTATTACAGACCACTGAGATTACCTGTATTACAGACCACTGAGATTACCTGTATTACAGACCACTGAGCCAGTCCagctggtctctccagagaggtcATGACAAGTGGCCAGTCCAGCTGGTAGCTCTAGAGAGGGCATGACCAGTGGCCAGTCCagctggtctctccagagaggtcATGACCAGTGGCCAGTCCagctggtctctccagagaggtcATGACCAGTGGCCAGTCCAGCTGGTAGCTCTAGAGAGGTCATGACCAGTGGCCAGTCCagctggtctctccagagaggtcATGACCAGTGGCCAGTCCAGCTGGTAGCTCTAGAGAGGTCATGACCAGTGGCCAGTCCAGCTGGTAGGTCCCGTGAGGTCATGACCAGTGGCCAGTCCAGCTGGTAGCTCTAGAGAGGTCATGACCAGTGGCCAGTCCagctggtctctccagagaggtcATGACCAGTGGCCAGTCCagctggtctctccagagagatCATAACCAGTGGCCAGTCCagctggtctctccagagaggtcATGACCAGTGGCCAGTCCagctggtctctccagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679120 True 625 lncRNA 0.56 3 931131 931995

Neighbor

gene id symbol gene type direction distance location
si:ch73-41e3.7 NA coding upstream 113290 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 162344 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 334794 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 625890 107069 ~ 305241 (+)
LOC118947137 NA coding downstream 13457 945293 ~ 946912 (+)
tpp2 tpp2 coding downstream 47598 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 270042 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 284082 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 373996 1305991 ~ 1333394 (+)
G2339933 NA non-coding upstream 18875 911803 ~ 912256 (+)
G2339926 NA non-coding upstream 26295 902593 ~ 904836 (+)
G2339913 NA non-coding upstream 31949 898335 ~ 899182 (+)
G2339911 NA non-coding upstream 38004 891240 ~ 893127 (+)
G2339925 NA non-coding upstream 41905 888588 ~ 889226 (+)
G2339958 NA non-coding downstream 22565 954560 ~ 954846 (+)
G2339960 NA non-coding downstream 39207 971202 ~ 971435 (+)
G2339962 NA non-coding downstream 46244 978239 ~ 978444 (+)
G2339966 NA non-coding downstream 58481 990476 ~ 991728 (+)
G2339912 NA other upstream 57292 870947 ~ 900840 (+)
G2339795 NA other upstream 245583 683344 ~ 685548 (+)
G2339478 NA other upstream 466664 463198 ~ 464467 (+)
G2339343 NA other upstream 833275 97115 ~ 97856 (+)
G2339955 NA other downstream 40484 972479 ~ 972783 (+)
G2340118 NA other downstream 184948 1116943 ~ 1118969 (+)

Expression


Co-expression Network