G2339960


Basic Information

Item Value
gene id G2339960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 971202 ~ 971435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679161
tgagtaacacaaacgagaatccgacaaagacaggagcaggaacagagagagatatagagacctaatcagagggaaaaagggaacaggtgggaaaaggggtgaacgaggtagttagagaagacaaggcacagctgggggaaagaggggaagaaaaggtaacctaatacgaccagcagagggagacagggtgaagagaaagaacaggaacaggacacaacatgacaatacatgaca

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679161 True 234 lncRNA 0.47 1 971202 971435

Neighbor

gene id symbol gene type direction distance location
LOC118947137 NA coding upstream 25189 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 153361 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 202415 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 374865 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 665961 107069 ~ 305241 (+)
tpp2 tpp2 coding downstream 8158 979593 ~ 1046298 (+)
blzf1 LOC106575890 coding downstream 230602 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 244642 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 334556 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 382492 1353782 ~ 1354415 (+)
G2339958 NA non-coding upstream 16356 954560 ~ 954846 (+)
G2339940 NA non-coding upstream 39207 931131 ~ 931995 (+)
G2339933 NA non-coding upstream 58946 911803 ~ 912256 (+)
G2339926 NA non-coding upstream 66366 902593 ~ 904836 (+)
G2339962 NA non-coding downstream 6804 978239 ~ 978444 (+)
G2339966 NA non-coding downstream 19041 990476 ~ 991728 (+)
G2339968 NA non-coding downstream 35195 1006630 ~ 1008051 (+)
G2339972 NA non-coding downstream 46114 1017549 ~ 1019705 (+)
G2339974 NA non-coding downstream 60777 1032212 ~ 1034525 (+)
G2339912 NA other upstream 97363 870947 ~ 900840 (+)
G2339795 NA other upstream 285654 683344 ~ 685548 (+)
G2339478 NA other upstream 506735 463198 ~ 464467 (+)
G2339343 NA other upstream 873346 97115 ~ 97856 (+)
G2339955 NA other downstream 1044 972479 ~ 972783 (+)
G2340118 NA other downstream 145508 1116943 ~ 1118969 (+)

Expression


Co-expression Network