G2339966


Basic Information

Item Value
gene id G2339966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 990476 ~ 991728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679170
tatacagtaCATTGGGTCCTACCAAtggtttacatacagtacattgggtCCTACCGGGTCCTACCAAtggtttacatacagtacattgggTCCTACCAAtggtttatatacagtacattgggTCCTACCAAtggtttacatacagtacattgggtCCTACCAAtggtttatatacagtacattgggTCCTACCAAtggtttacatacagtacattgggtCCTACCAAtggtttatatacagtacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679170 True 247 lncRNA 0.40 3 990476 991728

Neighbor

gene id symbol gene type direction distance location
LOC118947137 NA coding upstream 44463 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 172635 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 221689 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 394139 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 685235 107069 ~ 305241 (+)
blzf1 LOC106575890 coding downstream 210309 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 224349 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 314263 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 362199 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 388540 1380268 ~ 1427883 (+)
G2339962 NA non-coding upstream 12032 978239 ~ 978444 (+)
G2339960 NA non-coding upstream 19041 971202 ~ 971435 (+)
G2339958 NA non-coding upstream 35630 954560 ~ 954846 (+)
G2339940 NA non-coding upstream 58481 931131 ~ 931995 (+)
G2339968 NA non-coding downstream 14902 1006630 ~ 1008051 (+)
G2339972 NA non-coding downstream 25821 1017549 ~ 1019705 (+)
G2339974 NA non-coding downstream 40484 1032212 ~ 1034525 (+)
G2339977 NA non-coding downstream 46810 1038538 ~ 1039068 (+)
G2340101 NA non-coding downstream 69637 1061365 ~ 1061690 (+)
G2339955 NA other upstream 17693 972479 ~ 972783 (+)
G2339912 NA other upstream 116637 870947 ~ 900840 (+)
G2339795 NA other upstream 304928 683344 ~ 685548 (+)
G2339478 NA other upstream 526009 463198 ~ 464467 (+)
G2339343 NA other upstream 892620 97115 ~ 97856 (+)
G2340118 NA other downstream 125215 1116943 ~ 1118969 (+)

Expression


Co-expression Network