G2339972


Basic Information

Item Value
gene id G2339972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1017549 ~ 1019705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679178
GGGGTAGtcaggtagtctataggtctacttctatgtgtaatcaggtagtctataggtctacttctatgtgtcatcaggtagtctataggtctacttctatgtgtcatcaggtagtctataggtctacttctatgtgtaatcaaggccaggtagtctgtaggtctacttctatgtgtaatcaggccaggtagtctataggtctacttctatgtgtaatcaggtagccTATAGACCTACTTCTATGTTTAATTAGGGCCAGGTAGTCTATAGACcgacttctatgtgtaatcagggtcaggatggattagtccactcagacaggcctctacaatggattagtccactcagacaggcctctacaatggattagtccactgagacaggcctctacaatggattagtccactcagacaggcctctacaatggattagtccgctcagacaggcctctacaatggattagtccactgagacaggcctccacaatggattagtccactcagacaggcctctacaatggattagtcctctcagacaggcctctacaatggattagtccactgagacaggcctctacaatggattagtccactgagacaggactctacaatggattagtccgctcagacaggcctctacaatggattagtccactgagacaggcctccgcaaaggattagtccactcagacaggcctctataatggattagtccactcagacaggcctctacaatggattagtccactcagacaggcctctacaatggattagtccactcagacaggtctctacaatggattagtccactcagacaggcctctacaatggattagtccactcagacaggcctctacaatggattagtccactgagacaggcctctataatggattagtccaatCAGACTCTACtgagacaggcgtgaatcagagAGGCGTCTGATCGACTAAAAAGatctcggtcgaccaacagcctatcgaccaatcAAATGACCAGGGGACTAAATGGGATCAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGGATTAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGGATCAGCCCTAGTAAACAATAGACCAGGGGACTAAATGGGATCAGCCCTAGGAAACAATAGACCAGTGGACTAAATGGGATCAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGGATCATCCCTGGGAAACAATAGACCAGGGGACTAAATGGGATCAGCCCTAGTGAACAATAGACCAGTGGACTAAATGGGATCAGCCCTAGTGAACAATAGACCAGTGGACTAAATGGGATCAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGGACCAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGTATCAGCCCTAGTAAACAATAGACCAGGGGACTAAATGGGATCAGTCCTAGGAAACAATAGACCAGGGGACTAATTGGGATCATCCCTATGAAACAATAGACCAGGGGACTAAATGGGATCAGTCCTAGGAAACAATAGGCCAGGGGACTAAATGGGATCAGCCCTAGGAAACAATAGACCAGGGGACTAAATGGGATCAGCCCTATGAAACAAACACAATATATCCAGGTGGTCTCTGTGATGCTGTTTTGACtgagtgtctctcctctctagtcAGGGAGGACAGTAGAGTTATGTGATGCTGTTTTGACtgagtgtctctcctctctagtcGGGGAGGACAGTAGAGTTATGTGATGCTGTTTTGACtgagtgtctctcctctctagtcagggaggacagtagagttatgtgtctctgtgatgcTGTTTTGACtgagtgtctctcctctctagtcagggaggacagtagagt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581711

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679178 True 1875 lncRNA 0.47 3 1017549 1019705

Neighbor

gene id symbol gene type direction distance location
LOC118947137 NA coding upstream 71536 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 199708 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 248762 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 421212 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 712308 107069 ~ 305241 (+)
blzf1 LOC106575890 coding downstream 182332 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 196372 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 286286 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 334222 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 360563 1380268 ~ 1427883 (+)
G2339968 NA non-coding upstream 9498 1006630 ~ 1008051 (+)
G2339966 NA non-coding upstream 25821 990476 ~ 991728 (+)
G2339962 NA non-coding upstream 39105 978239 ~ 978444 (+)
G2339960 NA non-coding upstream 46114 971202 ~ 971435 (+)
G2339958 NA non-coding upstream 62703 954560 ~ 954846 (+)
G2339974 NA non-coding downstream 12507 1032212 ~ 1034525 (+)
G2339977 NA non-coding downstream 18833 1038538 ~ 1039068 (+)
G2340101 NA non-coding downstream 41660 1061365 ~ 1061690 (+)
G2340105 NA non-coding downstream 48223 1067928 ~ 1092799 (+)
G2340113 NA non-coding downstream 80332 1100037 ~ 1100972 (+)
G2339955 NA other upstream 44766 972479 ~ 972783 (+)
G2339912 NA other upstream 143710 870947 ~ 900840 (+)
G2339795 NA other upstream 332001 683344 ~ 685548 (+)
G2339478 NA other upstream 553082 463198 ~ 464467 (+)
G2339343 NA other upstream 919693 97115 ~ 97856 (+)
G2340118 NA other downstream 97238 1116943 ~ 1118969 (+)

Expression


Co-expression Network