G2339977


Basic Information

Item Value
gene id G2339977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1038538 ~ 1039068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679184
tctctacctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcagtctgtctgtttgggtctctctacctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcagtctctctctgtctgtttgggtCTCTCAACCTGCTGTCAGtctctctgtttgggtctctacctgctgtcagtctctctctgtctgtttgggtCTCTCAACctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcagtctctctgtttgggtctctctacctgctgtcagtctctctctgtctgtttgggtCTCTCAACctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcagtctctctctgtctgtttgggtctctctacctgctgtcag

Function

NR:

description
PREDICTED: remodeling and spacing factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679184 True 465 lncRNA 0.51 2 1038538 1039068

Neighbor

gene id symbol gene type direction distance location
LOC118947137 NA coding upstream 92525 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 220697 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 269751 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 442201 595503 ~ 596337 (+)
LOC118947131 LOC103365236 coding upstream 733297 107069 ~ 305241 (+)
blzf1 LOC106575890 coding downstream 162969 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 177009 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 266923 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 314859 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 341200 1380268 ~ 1427883 (+)
G2339974 NA non-coding upstream 4013 1032212 ~ 1034525 (+)
G2339972 NA non-coding upstream 18833 1017549 ~ 1019705 (+)
G2339968 NA non-coding upstream 30487 1006630 ~ 1008051 (+)
G2339966 NA non-coding upstream 46810 990476 ~ 991728 (+)
G2339962 NA non-coding upstream 60094 978239 ~ 978444 (+)
G2340101 NA non-coding downstream 22297 1061365 ~ 1061690 (+)
G2340105 NA non-coding downstream 28860 1067928 ~ 1092799 (+)
G2340113 NA non-coding downstream 60969 1100037 ~ 1100972 (+)
G2340118 NA non-coding downstream 77875 1116943 ~ 1118969 (+)
G2340119 NA non-coding downstream 80408 1119476 ~ 1124849 (+)
G2339955 NA other upstream 65755 972479 ~ 972783 (+)
G2339912 NA other upstream 164699 870947 ~ 900840 (+)
G2339795 NA other upstream 352990 683344 ~ 685548 (+)
G2339478 NA other upstream 574071 463198 ~ 464467 (+)
G2339343 NA other upstream 940682 97115 ~ 97856 (+)

Expression


Co-expression Network