G2340118


Basic Information

Item Value
gene id G2340118
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1116943 ~ 1118969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679430
CAGAGTtgtttataatgtactgtatttacaGACCAGAGGTGTTTATAATGTAcattatttctcagaacaatttaCAGACCAGAGGtgtttataattattattatagcaACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGACACTATACATCTTCAATCAGAGATACAACTGAATAACAGAGAAAACAATAATATACTGATCTGCCCAGACGTGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGGGAAGGAGAGTTCAAGACccagacatggagggaaggagagttcAAGACCCAGACATGAAGAGAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGgaccagatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttgcaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttt
>TU2679439
CAGAGTtgtttataatgtactgtatttacaGACCAGAGGTGTTTATAATGTAcattatttctcagaacaatttaCAGACCAGAGGtgtttataattattattatagcaACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGACACTATACATCTTCAATCAGAGATACAACTGAATAACAGAGAAAACAATAATATACTGATCTGCCCAGACGTGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGGGAAGGAGAGTTCAAGACccagacatggagggaaggagagttcAAGACCCAGACATGAAGAGAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGgaccagatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttgcaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttt
>TU2679448
CAGAGTtgtttataatgtactgtatttacaGACCAGAGGTGTTTATAATGTAcattatttctcagaacaatttaCAGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGCgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataattattattatagcaACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTCTCGATATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTCTCGATATGTACAGCAACACATCAGGTGAAGCAGACACTATACATCTTCAATCAGAGATACAACTGAATAACAGAGAAAACAATAATATACTGATCTGCCCAGACGTGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGGGAAGGAGAGTTCAAGACccagacatggagggaaggagagttcAAGACCCAGACATGAAGAGAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGgaccagatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttgcaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttt
>TU2679450
CAGAGTtgtttataatgtactgtatttacaGACCAGAGGTGTTTATAATGTAcattatttctcagaacaatttaCAGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGCgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataatgtactgtatttacaGACCAGAGGtgtttataattattattatagcaACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATTAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATTAGGTGAAGCAGGTCTCGATATGTACAGCAACACATCAGGTGAAGCAGACACTATACATCTTCAATCAGAGATACAACTGAATAACAGAGAAAACAATAATATACTGATCTGCCCAGACGTGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGaggagagttcAAGACCCAGACATGAAGAGAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGgaccagatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttgcaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttt
>TU2679451
CAGAGTtgtttataatgtactgtatttacaGACCAGAGGTGTTTATAATGTAcattatttctcagaacaatttaCAGACCAGAGGtgtttataattattattatagcaACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTCTTGTTATGTACAGCAACACAACAGGTGAAGCAGGTTCTTGTTATGTACAGCAACACATCAGGTGAAGCAGGTCTCGATATGTACAGCAACACATCAGGTGAAGCAGACACTATACATCTTCAATCAGAGATACAACTGAATAACAGAGAAAACAATAATATACTGATCTGCCCAGACGTGAAGAGAAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGGCCCAGACATGAAGAGAGGAGAGTTCAAGGCCCAGACATGAAGAGAAGGAGAGTTCAAGGCCCAGACATGAAGGGAAGGAGAGTTCAAGACccagacatggagggaaggagagttcAAGACCCAGACATGAAGAGAGGAGAGTTCAAGACCCAGACATGAAGAGAGGAGAGTTCAAGgaccagatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttgcaacataaagatataaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679430 False 733 TUCP 0.41 4 1116943 1118969
TU2679439 False 883 lncRNA 0.42 7 1116943 1118969
TU2679448 False 1117 TUCP 0.41 5 1116943 1118969
TU2679450 False 936 lncRNA 0.39 6 1116943 1118969
TU2679451 True 816 lncRNA 0.42 7 1116943 1118969

Neighbor

gene id symbol gene type direction distance location
tpp2 tpp2 coding upstream 70645 979593 ~ 1046298 (+)
LOC118947137 NA coding upstream 170930 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 299102 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 348156 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 520606 595503 ~ 596337 (+)
blzf1 LOC106575890 coding downstream 83068 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 97108 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 187022 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 234958 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 261299 1380268 ~ 1427883 (+)
G2340113 NA non-coding upstream 15971 1100037 ~ 1100972 (+)
G2340105 NA non-coding upstream 24144 1067928 ~ 1092799 (+)
G2340101 NA non-coding upstream 55253 1061365 ~ 1061690 (+)
G2339977 NA non-coding upstream 77875 1038538 ~ 1039068 (+)
G2339974 NA non-coding upstream 82418 1032212 ~ 1034525 (+)
G2340119 NA non-coding downstream 507 1119476 ~ 1124849 (+)
G2340121 NA non-coding downstream 2830 1121799 ~ 1123838 (+)
G2340123 NA non-coding downstream 7326 1126295 ~ 1128695 (+)
G2340125 NA non-coding downstream 12811 1131780 ~ 1132281 (+)
G2340126 NA non-coding downstream 17044 1136013 ~ 1136342 (+)
G2339955 NA other upstream 144160 972479 ~ 972783 (+)
G2339912 NA other upstream 243104 870947 ~ 900840 (+)
G2339795 NA other upstream 431395 683344 ~ 685548 (+)
G2339478 NA other upstream 652476 463198 ~ 464467 (+)
G2339343 NA other upstream 1019087 97115 ~ 97856 (+)

Expression


Co-expression Network