Gene
RNA
| Item | Value |
|---|---|
| gene id | G2340157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493665.1 |
| NCBI id | JAAXML020000242.1 |
| chromosome length | 1484196 |
| location | 1159106 ~ 1159857 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2679524 | False | 752 | lncRNA | 0.52 | 1 | 1159106 | 1159857 |
| TU2679525 | True | 243 | lncRNA | 0.42 | 1 | 1159106 | 1159348 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tpp2 | tpp2 | coding | upstream | 112808 | 979593 ~ 1046298 (+) |
| LOC118947137 | NA | coding | upstream | 213093 | 945293 ~ 946912 (+) |
| si:ch73-41e3.7 | NA | coding | upstream | 341265 | 811487 ~ 817841 (+) |
| LOC110495334 | LOC106575937 | coding | upstream | 390319 | 762579 ~ 768787 (+) |
| LOC118947129 | NA | coding | upstream | 562769 | 595503 ~ 596337 (+) |
| blzf1 | LOC106575890 | coding | downstream | 42180 | 1202037 ~ 1209051 (+) |
| pibf1 | pibf1 | coding | downstream | 56220 | 1216077 ~ 1301282 (+) |
| klf5a | LOC106593200 | coding | downstream | 146134 | 1305991 ~ 1333394 (+) |
| LOC118947132 | NA | coding | downstream | 194070 | 1353782 ~ 1354415 (+) |
| lmo7b | LOC106575016 | coding | downstream | 220411 | 1380268 ~ 1427883 (+) |
| G2340128 | NA | non-coding | upstream | 12091 | 1146688 ~ 1147015 (+) |
| G2340126 | NA | non-coding | upstream | 22764 | 1136013 ~ 1136342 (+) |
| G2340125 | NA | non-coding | upstream | 26825 | 1131780 ~ 1132281 (+) |
| G2340123 | NA | non-coding | upstream | 30411 | 1126295 ~ 1128695 (+) |
| G2340119 | NA | non-coding | upstream | 34257 | 1119476 ~ 1124849 (+) |
| G2340162 | ercc5 | non-coding | downstream | 12596 | 1172453 ~ 1172907 (+) |
| G2340165 | NA | non-coding | downstream | 38637 | 1198494 ~ 1199135 (+) |
| G2340171 | NA | non-coding | downstream | 44276 | 1204133 ~ 1205065 (+) |
| G2340150 | NA | non-coding | downstream | 49440 | 1209297 ~ 1209995 (+) |
| G2340160 | NA | non-coding | downstream | 50308 | 1210165 ~ 1210650 (+) |
| G2340118 | NA | other | upstream | 40137 | 1116943 ~ 1118969 (+) |
| G2339955 | NA | other | upstream | 186323 | 972479 ~ 972783 (+) |
| G2339912 | NA | other | upstream | 285267 | 870947 ~ 900840 (+) |
| G2339795 | NA | other | upstream | 473558 | 683344 ~ 685548 (+) |
| G2339478 | NA | other | upstream | 694639 | 463198 ~ 464467 (+) |
