G2340165


Basic Information

Item Value
gene id G2340165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1198494 ~ 1199135 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679535
CTTTGATGAGGATGTAGTGGGTGGAGTCTTCTGAGAGGAGGCGTCGTGTCTCCACGCTGTGCCCCTCCCCCTGGTTGTATAGCTCCACCCCCGGGGCGTTCCCAGCACTACGGttggacatctctctctccaccccctccagacgCACGTTCAGCTTGTTCCTCTGCAGCAGTCCTGCTAGCTGGTACTGGGAGAAGTCCCCTGACCGCTGGGAGGGGGGGGTTAGggtgcatgacacacacacacacacagagagagacagtgtgtgtggtaCCTCAGGAGGTGTGTGGTACCTCAGGAGGTGTGTGGTACCTCAGGAGGTGTGTGGTACATGGTGCGTCGTCTCTTGCTGAATTCCTTCATGTCTTTAAGGATCTCATGTTTCACCTCAGGAGGCATGGCAGAAAACTCCTCAGAGTTGATGTCCACAGAGTTAGAGTCTTCAAAGAAATCCccctgacagacaggcagacagacaggcaggaaggcagacagacagacacatacgcacagacagacagatagacaggcagacaggcacatacgcacagacagacaggcagacaggcagata

Function

NR:

description
DNA repair protein complementing XP-G cells

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679535 True 574 lncRNA 0.55 2 1198494 1199135

Neighbor

gene id symbol gene type direction distance location
tpp2 tpp2 coding upstream 152196 979593 ~ 1046298 (+)
LOC118947137 NA coding upstream 252481 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 380653 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 429707 762579 ~ 768787 (+)
LOC118947129 NA coding upstream 602157 595503 ~ 596337 (+)
blzf1 LOC106575890 coding downstream 2902 1202037 ~ 1209051 (+)
pibf1 pibf1 coding downstream 16942 1216077 ~ 1301282 (+)
klf5a LOC106593200 coding downstream 106856 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 154792 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 181133 1380268 ~ 1427883 (+)
G2340162 ercc5 non-coding upstream 25587 1172453 ~ 1172907 (+)
G2340157 NA non-coding upstream 38637 1159106 ~ 1159857 (+)
G2340128 NA non-coding upstream 51479 1146688 ~ 1147015 (+)
G2340126 NA non-coding upstream 62152 1136013 ~ 1136342 (+)
G2340125 NA non-coding upstream 66213 1131780 ~ 1132281 (+)
G2340171 NA non-coding downstream 4998 1204133 ~ 1205065 (+)
G2340150 NA non-coding downstream 10162 1209297 ~ 1209995 (+)
G2340160 NA non-coding downstream 11030 1210165 ~ 1210650 (+)
G2340179 NA non-coding downstream 43339 1242474 ~ 1255859 (+)
G2340195 NA non-coding downstream 71200 1270335 ~ 1271557 (+)
G2340118 NA other upstream 79525 1116943 ~ 1118969 (+)
G2339955 NA other upstream 225711 972479 ~ 972783 (+)
G2339912 NA other upstream 324655 870947 ~ 900840 (+)
G2339795 NA other upstream 512946 683344 ~ 685548 (+)
G2339478 NA other upstream 734027 463198 ~ 464467 (+)

Expression


Co-expression Network