G2340196


Basic Information

Item Value
gene id G2340196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 1280096 ~ 1280993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2679591
gtaacacatcacacaggacagatctctgaggaggtatcacacaggacagatctctgaggaggtaacacacaggacagatctcTGAGGAGGCAACACATCACACAGGACAGATCTCTGAGGAGgtaacacacaggacagatctctgaggaggtaacacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacacaggacagatctctgaggaggtaacacatcacacaggacagatctctgaggaggtaacacatcacacaggacagatctctgaggaggtaacacacaggacagatctttgaggaggtaacacacacaggacagatctctgaggaggtaacacacaggacagatctcTGAGGAGGTATCACACACAGGGC
>TU2679592
gtaacacatcacacaggacagatctctgaggaggtatcacacaggacagatctctgaggaggtaacacacaggacagatctcTGAGGAGGCAACACATCACACAGGACAGATCTCTGAGGAGgtaacacacaggacagatctctgaggaggtaacacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacacgggacagatctctgaggaggtaacacatcacacaggacagatctctgaggaggtatcacacaggacagatctctgaggagataacacacaggacagatctctgaggaggtaacacacaggacagatctctgaggaggtaacacatcacacaggacagatctctgaggaggtatcacacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2679591 False 518 lncRNA 0.50 2 1280096 1280849
TU2679592 True 453 lncRNA 0.50 2 1280096 1280993

Neighbor

gene id symbol gene type direction distance location
blzf1 LOC106575890 coding upstream 71422 1202037 ~ 1209051 (+)
tpp2 tpp2 coding upstream 233798 979593 ~ 1046298 (+)
LOC118947137 NA coding upstream 334083 945293 ~ 946912 (+)
si:ch73-41e3.7 NA coding upstream 462255 811487 ~ 817841 (+)
LOC110495334 LOC106575937 coding upstream 511309 762579 ~ 768787 (+)
klf5a LOC106593200 coding downstream 24998 1305991 ~ 1333394 (+)
LOC118947132 NA coding downstream 72934 1353782 ~ 1354415 (+)
lmo7b LOC106575016 coding downstream 99275 1380268 ~ 1427883 (+)
LOC110515241 LOC106575016 coding downstream 111370 1392363 ~ 1395554 (+)
G2340195 NA non-coding upstream 8539 1270335 ~ 1271557 (+)
G2340179 NA non-coding upstream 24237 1242474 ~ 1255859 (+)
G2340160 NA non-coding upstream 69446 1210165 ~ 1210650 (+)
G2340150 NA non-coding upstream 70101 1209297 ~ 1209995 (+)
G2340171 NA non-coding upstream 75031 1204133 ~ 1205065 (+)
G2340198 NA non-coding downstream 7450 1288443 ~ 1288976 (+)
G2340199 NA non-coding downstream 8809 1289802 ~ 1292166 (+)
G2340202 NA non-coding downstream 21207 1302200 ~ 1302756 (+)
G2340203 NA non-coding downstream 22390 1303383 ~ 1303812 (+)
G2340209 NA non-coding downstream 44176 1325169 ~ 1326862 (+)
G2340118 NA other upstream 161127 1116943 ~ 1118969 (+)
G2339955 NA other upstream 307313 972479 ~ 972783 (+)
G2339912 NA other upstream 406257 870947 ~ 900840 (+)
G2339795 NA other upstream 594548 683344 ~ 685548 (+)

Expression


Co-expression Network