G959


Basic Information

Item Value
gene id G959
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3082231 ~ 3083136 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1311
acccacggaaaatactgaccgCCCAcgagtgccagactgccagttcatttttacgttaatctaaaattaaacactgcagttgtggagcgtctgtcatagtgtgattggttgtgtcggtggcattgattcttaatttcccacgaagctgatcgcggttacgtgccagttaaacttttcatctccgatcctatctgtatttgtgagaagtggcgctgtcctgagttgaaagatagcttataggctaggcctactgtgcgcgtgtgagcacccacggaggaaaacataaattggCGCCTATCCCTCTGCACAgcaaataataaagtttggctataaggattacacatatgaccaggcaaagaaaaaaaaagaaacggcaGTTTGCAAGGTCTGCAGTACTTATTTCCGACGTcgaatttcatcagacacttcaaatcgggagagattcaggttccagtccccatattcagctgaaccactATTTGGACGTTTGTAATGGACAGAAGTCCCTTCAGTTTTTggccatgaataagcacaccctcccctctttgttcAAGGTGGCGGTAAGAGCGAATAAAACTAggcacacataggcctacacacacaacacaaacctctctctctctctctctctctctctctctcataaacacacacacatgcagacgtaagtatgtgaataaagctaggcacacatacaacacactgcactctcaaacacgcacacattcactcacaaatacactgtcaaatatcaacatatactttccattccatgtgataagCAAAGGTGGTGGTATTCAGCTATTctcaaagaatatgttttgttctttaagagaaggaaaggttaaaggatgtgtttctgtctcataaaagtgaggcatgtttgaagaatattatttgacttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1311 True 906 lncRNA 0.44 1 3082231 3083136

Neighbor

gene id symbol gene type direction distance location
tmem178 tmem178a,LOC102307988 coding upstream 104802 2938097 ~ 2977429 (+)
eif4a3 eif4a3 coding upstream 191226 2882923 ~ 2891005 (+)
LOC120561808 srf,LOC103372093 coding upstream 201111 2858504 ~ 2881120 (+)
LOC120566159 NA coding upstream 497969 2572980 ~ 2584262 (+)
LOC120561353 LOC102083160 coding upstream 687944 2362732 ~ 2394287 (+)
LOC120557776 NA coding downstream 26455 3109591 ~ 3128050 (+)
LOC120557788 LOC100703858,LOC102778772,LOC103375691,LOC101465362,LOC107082671 coding downstream 74067 3157203 ~ 3159292 (+)
LOC120550686 LOC106676715 coding downstream 281680 3364816 ~ 3373141 (+)
rrbp1b NA coding downstream 330289 3413425 ~ 3448493 (+)
LOC120555395 NA coding downstream 405207 3488343 ~ 3490010 (+)
G973 NA non-coding upstream 36688 3044933 ~ 3045543 (+)
G969 NA non-coding upstream 89659 2992217 ~ 2992572 (+)
G960 NA non-coding upstream 90561 2983259 ~ 2991670 (+)
G968 NA non-coding upstream 92632 2988953 ~ 2989599 (+)
G953 NA non-coding upstream 99515 2980433 ~ 2982716 (+)
G1045 NA non-coding downstream 13226 3096362 ~ 3135361 (+)
G1093 NA non-coding downstream 187877 3271013 ~ 3272231 (+)
G1098 NA non-coding downstream 242479 3325615 ~ 3384416 (+)
LOC120551115 NA non-coding downstream 256359 3339495 ~ 3341743 (+)
G1145 NA non-coding downstream 316931 3400067 ~ 3400331 (+)
LOC120567073 sos1 other upstream 2041 2995029 ~ 3080190 (+)
LOC120567079 NA other upstream 10758 3068398 ~ 3071473 (+)
G879 NA other upstream 381256 2626243 ~ 2700975 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other upstream 511777 2558876 ~ 2570454 (+)
G714 LOC103375176,LOC105920176,LOC100706186,LOC101468385 other upstream 736183 2307285 ~ 2346048 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other downstream 44953 3128089 ~ 3157138 (+)
dzank1 NA other downstream 92465 3175601 ~ 3259758 (+)
LOC120555387 LOC106675676,LOC106675675 other downstream 384988 3468124 ~ 3480130 (+)
G1191 NA other downstream 413470 3496606 ~ 3499104 (+)
LOC120562910 NA other downstream 709610 3792746 ~ 3814570 (+)

Expression


Co-expression Network