G1003 (tmem178a)


Basic Information

Item Value
gene id G1003
gene name tmem178a
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2963740 ~ 2964320 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1366
GGTCGATGAGCTTGTCGATGTCTGGGTCCAGACCCCGGAAGTAGCACTTCCTCCAGAGGCCGGAGTGCGCGGAGAACAGCGGCCTGCCGCACTCCGTCTCCAGGATGCCCATCCCCAGGATGGCCCGCCAGTTCTCCAGCAGCTCCTCCTCGCGGCTGCCCACGTGCACGGGCTTCATGTGCGCCACGTCCCGCGGCCGCGCGCCGCCGCTGCCGGTGTCTACGAGCGGCAGGTGGTAGATGGGCATCTCTCGGTTCTTCTGGTCGTTGGAATCGGACCCGTGGCGGTCGCAGTTGTCCTTGTGTCTGCGCGTGTCCGTCTCGTACCAGTGGTCGGAGGAGATGGCGGTGacgagcagcagcagcgccatcACGCTGAGCGCGAGGCTCACCGCGGACACGGTGACGGTGGCCGGCCGCGCTCTCTCCATGGCCGGGACCGCCGGGACCGCCGGGCCGCTCCCGGGACCGGTACCGGAGCCGCTGGTTCCGTTACTGTGCATCTTCAGCTGCCATCGCGGTCCGCGCGCACTCAGCCGTTCCCCGTGCAGCCTCCGGAGCGCGTTGTCATGCCGACTGACG

Function

symbol description
tmem178a Predicted to be involved in negative regulation of osteoclast differentiation and regulation of cytosolic calcium ion concentration. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane.

NR:

description
PREDICTED: transmembrane protein 178A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1366 True 581 TUCP 0.34 1 2963740 2964320

Neighbor

gene id symbol gene type direction distance location
soul4 NA coding downstream 52209 2901146 ~ 2911531 (-)
LOC120566216 NA coding downstream 166588 2738444 ~ 2797152 (-)
LOC120566206 NA coding downstream 230462 2716457 ~ 2733278 (-)
zgc:110222 LOC103372080,LOC100694267 coding downstream 270097 2689977 ~ 2693643 (-)
aars2 aars2 coding downstream 337786 2593535 ~ 2625954 (-)
gemin6 NA coding upstream 135349 3099669 ~ 3107278 (-)
LOC120550828 NA coding upstream 315106 3279426 ~ 3286257 (-)
LOC120550893 NA coding upstream 387026 3351346 ~ 3382291 (-)
kat14 NA coding upstream 419211 3383531 ~ 3399979 (-)
trnak-uuu NA coding upstream 462630 3426950 ~ 3427022 (-)
G1001 NA non-coding downstream 22797 2940692 ~ 2940943 (-)
G1000 NA non-coding downstream 24102 2939384 ~ 2939638 (-)
G989 eif4a3 non-coding downstream 72667 2889117 ~ 2891073 (-)
G984 NA non-coding downstream 81504 2880867 ~ 2882236 (-)
G982 NA non-coding downstream 83068 2879059 ~ 2880672 (-)
G1007 NA non-coding upstream 8042 2972362 ~ 2972567 (-)
G1010 NA non-coding upstream 18943 2983263 ~ 2991682 (-)
G1013 NA non-coding upstream 29790 2994110 ~ 2995538 (-)
G1028 NA non-coding upstream 76264 3040584 ~ 3040911 (-)
G1039 NA non-coding upstream 117427 3081747 ~ 3081962 (-)
G974 NA other downstream 104438 2858496 ~ 2859302 (-)
G670 LOC103370005,LOC106529077 other downstream 913356 2049069 ~ 2050384 (-)
LOC120566421 NA other downstream 1214048 1733546 ~ 1749692 (-)
stab2 NA other downstream 1387245 1470417 ~ 1576495 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 1603267 1359664 ~ 1360473 (-)
G1008 tmem178a,LOC102307988 other upstream 10918 2975238 ~ 2978115 (-)
LOC120550954 NA other upstream 268304 3232624 ~ 3241497 (-)
LOC120550734 LOC106675350 other upstream 305202 3269522 ~ 3274443 (-)
LOC120551010 NA other upstream 341149 3305469 ~ 3313049 (-)
LOC120551303 NA other upstream 444501 3408821 ~ 3410295 (-)

Expression


Co-expression Network