G1041


Basic Information

Item Value
gene id G1041
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3085634 ~ 3085850 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1413
ctggtccagtcgcagtgctgtaaactggcagcttttaatgttgcagactacttattctttagtagtttttaagtgtaaacatgtattgttattgtgaatctttggtttaaactagctttcaaacaaacgccccccaacGGCACCTCAACgcttttccaaaatattgcttccaacgccccccatcatcttctgaacgccccctggggggcggtaccgc

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU1413 True 217 lncRNA 0.48 1 3085634 3085850

Neighbor

gene id symbol gene type direction distance location
soul4 NA coding downstream 174103 2901146 ~ 2911531 (-)
LOC120566216 NA coding downstream 288482 2738444 ~ 2797152 (-)
LOC120566206 NA coding downstream 352356 2716457 ~ 2733278 (-)
zgc:110222 LOC103372080,LOC100694267 coding downstream 391991 2689977 ~ 2693643 (-)
aars2 aars2 coding downstream 459680 2593535 ~ 2625954 (-)
gemin6 NA coding upstream 13819 3099669 ~ 3107278 (-)
LOC120550828 NA coding upstream 193576 3279426 ~ 3286257 (-)
LOC120550893 NA coding upstream 265496 3351346 ~ 3382291 (-)
kat14 NA coding upstream 297681 3383531 ~ 3399979 (-)
trnak-uuu NA coding upstream 341100 3426950 ~ 3427022 (-)
G1039 NA non-coding downstream 3672 3081747 ~ 3081962 (-)
G1028 NA non-coding downstream 44723 3040584 ~ 3040911 (-)
G1013 NA non-coding downstream 90096 2994110 ~ 2995538 (-)
G1010 NA non-coding downstream 93952 2983263 ~ 2991682 (-)
G1007 NA non-coding downstream 113067 2972362 ~ 2972567 (-)
G1065 NA non-coding upstream 15857 3101707 ~ 3102043 (-)
G1079 NA non-coding upstream 75100 3160950 ~ 3161871 (-)
G1104 NA non-coding upstream 89516 3175366 ~ 3185505 (-)
LOC120551073 NA non-coding upstream 188651 3274501 ~ 3278176 (-)
LOC120551207 NA non-coding upstream 227200 3313050 ~ 3324222 (-)
G1008 tmem178a,LOC102307988 other downstream 107519 2975238 ~ 2978115 (-)
G1003 tmem178a other downstream 121314 2963740 ~ 2964320 (-)
G974 NA other downstream 226332 2858496 ~ 2859302 (-)
G670 LOC103370005,LOC106529077 other downstream 1035250 2049069 ~ 2050384 (-)
LOC120566421 NA other downstream 1335942 1733546 ~ 1749692 (-)
LOC120550954 NA other upstream 146774 3232624 ~ 3241497 (-)
LOC120550734 LOC106675350 other upstream 183672 3269522 ~ 3274443 (-)
LOC120551010 NA other upstream 219619 3305469 ~ 3313049 (-)
LOC120551303 NA other upstream 322971 3408821 ~ 3410295 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other upstream 409037 3494887 ~ 3648473 (-)

Expression


Co-expression Network