LOC120550954


Basic Information

Item Value
gene id LOC120550954
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3232624 ~ 3241497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1507
CACGTTTGAGCTTCAATGTGAGATATACCAGAAACGTCAAAGAGAAcagtggagaggaggaggagaatcaGCTGAAGATCTTAGAGGATGAAGAGCTTTACGCTGAACTCAAGCCACAAAGAGCCAGACCACGCAATCCTGCAGCCTGCAACAGAAGGTGCTTCAGAGCTACTGCAGTGACTCTGGGAGGGTTTTATCTTCTGGTATTGGCTGGACTCTTCGTTCGCTTCACTTTGCTGCAGACCAGATACGAGATGCTGCAGACCAGATTTGACCAACTAAGCAGCAACTACAGCCAGATCCAGAGCAACGTTTCTGACAAATCCATCGAAATCAGTCAGTTACAGAGCAGCTATGAAACACTGAGTGTAAATCTCAGTCAGTTACAGGATGAAGTAAAGACGCTGAAGACCAGAATTAAAGAAGTTTGTCACTGAGCTGAG
>XM_039788009.1
GCTGTACATGCTCTTGCTGCGCCACGTTTGAGCTTCAATGTGAGATATACCAGAAACGTCAAAGAGAAcagtggagaggaggaggagaatcaGCTGAAGATCTTAGAGGATGAAGAGCTTTACGCTGAACTCAAGCCACAAAGAGCCAGACCACGCAATCCTGCAGCCTGCAACAGAAGGTGCTTCAGAGCTACTGCAGTGACTCTGGGAGGGTTTTATCTTCTGGTATTGGCTGGACTCTTCGTTCGCTTCACTTTGCTGCAGACCAGATACGAGATGCTGCAGACCAGATTTGACCAACTAAGCAGCAACTACAGCCAGATCCAGAGCAACGTTTCTGACAAATCCATCGAAATCAGTCAGTTACAGAGCAGCTATGAAACACTGAGTGTAAATCTCAGTCAGTTACAGGATGAAGTAAAGACGCTGAAGACCAGAATTAAAGAGAAGCTCTGTCCGGACAGATGGAAGAGATTTGGATGCAGTTTTTACTTTAAATCTGAAAAGAGGAAGTATTGGTATGGAAGCAGAGATGACTGTGAGCAGAGTGGAGCACATCTGGTCGTCATAAACAACGAAGAGGAACAGAAGTTTGTCACTGAGCTGAGTAAGGATGGAGAGTACTGGATTGGTCTAAGGTATGGACGGAGACAAGGAGAATACAAATGGCAATGGGTCGACGGATCACCGCTGACAGAAACGTTCTGGGCATCAGGACTGCCTCATGATTACGGTAACTTTACCGCTGTAACATGTTGCGATCAACAAGGAAAATGGAGACAAAGAAGAAATGATGGAAGTTATCATGGCCCTAAGAAGTGGATCTGTGAGAAAGAGATTCACTGAACTCTGTGATGACAGAGGGGGGTGTAGTGTTGGGATCAGCTTTGTCAAATCAGACTTTAACATTTTGCTCAGTAGTTTATTCTGTGTTGTTCTAAATAACCTGGATTACATAGATATCGTCCCTCTGCCCTTCATAGTGCACAATCTGGTTAGAAGTCCTGAGCACTTACTCTGTAGTCCTACAGGATTATAATAGCATTTCCATATAgccacttaaaaatgtgcaatgatacGTAACAACATTGTTTTGGGACAAAACTTTCACTTTAGCTTTTTGTTTATCGCAAATACATATTGTGTAATGTTACCGCAAACTCAACAAACACTTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1507 False 443 lncRNA 0.50 5 3238098 3241475
XM_039788009.1 True 1178 mRNA 0.43 7 3232624 3241497

Neighbor

gene id symbol gene type direction distance location
gemin6 NA coding downstream 125346 3099669 ~ 3107278 (-)
soul4 NA coding downstream 321093 2901146 ~ 2911531 (-)
LOC120566216 NA coding downstream 435472 2738444 ~ 2797152 (-)
LOC120566206 NA coding downstream 499346 2716457 ~ 2733278 (-)
zgc:110222 LOC103372080,LOC100694267 coding downstream 538981 2689977 ~ 2693643 (-)
LOC120550828 NA coding upstream 37929 3279426 ~ 3286257 (-)
LOC120550893 NA coding upstream 109849 3351346 ~ 3382291 (-)
kat14 NA coding upstream 142034 3383531 ~ 3399979 (-)
trnak-uuu NA coding upstream 185453 3426950 ~ 3427022 (-)
srd5a2a NA coding upstream 425416 3666913 ~ 3682870 (-)
G1104 NA non-coding downstream 47119 3175366 ~ 3185505 (-)
G1079 NA non-coding downstream 70753 3160950 ~ 3161871 (-)
G1065 NA non-coding downstream 130581 3101707 ~ 3102043 (-)
G1041 NA non-coding downstream 146774 3085634 ~ 3085850 (-)
G1039 NA non-coding downstream 150662 3081747 ~ 3081962 (-)
LOC120551073 NA non-coding upstream 33004 3274501 ~ 3278176 (-)
LOC120551207 NA non-coding upstream 71553 3313050 ~ 3324222 (-)
LOC120551162 NA non-coding upstream 101870 3343367 ~ 3345941 (-)
LOC120551253 NA non-coding upstream 144753 3386250 ~ 3387744 (-)
G1149 NA non-coding upstream 166267 3407764 ~ 3407971 (-)
G1008 tmem178a,LOC102307988 other downstream 254509 2975238 ~ 2978115 (-)
G1003 tmem178a other downstream 268304 2963740 ~ 2964320 (-)
G974 NA other downstream 373322 2858496 ~ 2859302 (-)
G670 LOC103370005,LOC106529077 other downstream 1182240 2049069 ~ 2050384 (-)
LOC120566421 NA other downstream 1482932 1733546 ~ 1749692 (-)
LOC120550734 LOC106675350 other upstream 28025 3269522 ~ 3274443 (-)
LOC120551010 NA other upstream 63972 3305469 ~ 3313049 (-)
LOC120551303 NA other upstream 167324 3408821 ~ 3410295 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other upstream 253390 3494887 ~ 3648473 (-)
G1240 NA other upstream 339721 3581218 ~ 3648230 (-)

Expression


Co-expression Network