LOC120551303


Basic Information

Item Value
gene id LOC120551303
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3408821 ~ 3410295 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1552
acgaagaagaagagTCGCTAACAACAGCATCAGAGCCAGTTAGCAGCTGGCTAACGTGAAGCTAAAGGCTAACGGCATGTCTACAACCTCTAAAGTGGTTCTGGGAGTTTCTGTGGTTCTGACTCTGAGCACCGTGGCTGGTGTTCACCTCAACCAGTCCTGGGACAGACAGcgtCTGCACGAGGGTGTAGTCCGAGATCTGGAGCGCctggagaggaagaaggagaaccTGAGGCTGCTGGAGGAGCAGAGGACACTGACCACACAGctggaggcagagagacagcgcagacagacaggctgagacagtgtttcctaaaagtccaagatgacgtcctcagatatctcgttttgtccacaactcaacgATATTCagtgtcctgtcccagaggagagaagaatcTAGAACATATCCATatttaacacgctgacatcacactaGTTCACCT
>XM_039788648.1
aactaCACCAGCAATagaagaagacgaagaagaagagTCGCTAACAACAGCATCAGAGCCAGTTAGCAGCTGGCTAACGTGAAGCTAAAGGCTAACGGCATGTCTACAACCTCTAAAGTGGTTCTGGGAGTTTCTGTGGTTCTGACTCTGAGCACCGTGGCTGGTGTTCACCTCAACCAGTCCTGGGACAGACAGcgtCTGCACGAGGGTGTAGTCCGAGATCTGGAGCGCctggagaggaagaaggagaaccTGAGGCTGCTGGAGGAGCAGAGGACACTGACCACACAGctggaggcagagagacagcgcagacagacaggctgaga

Function

GO:

id name namespace
GO:0070013 intracellular organelle lumen cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0043233 organelle lumen cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1552 True 449 TUCP 0.47 3 3408821 3410272
XM_039788648.1 False 329 mRNA 0.54 2 3409052 3410295

Neighbor

gene id symbol gene type direction distance location
kat14 NA coding downstream 8842 3383531 ~ 3399979 (-)
LOC120550893 NA coding downstream 26530 3351346 ~ 3382291 (-)
LOC120550828 NA coding downstream 122564 3279426 ~ 3286257 (-)
gemin6 NA coding downstream 301543 3099669 ~ 3107278 (-)
soul4 NA coding downstream 497290 2901146 ~ 2911531 (-)
trnak-uuu NA coding upstream 16655 3426950 ~ 3427022 (-)
srd5a2a NA coding upstream 256618 3666913 ~ 3682870 (-)
slc8a1a LOC100709284,LOC101487495,LOC102200447 coding upstream 411685 3821980 ~ 3853797 (-)
LOC120568258 NA coding upstream 469592 3879887 ~ 3901747 (-)
LOC120568380 NA coding upstream 503503 3913798 ~ 3945416 (-)
G1150 NA non-coding downstream 31 3408450 ~ 3408790 (-)
G1149 NA non-coding downstream 850 3407764 ~ 3407971 (-)
LOC120551253 NA non-coding downstream 21077 3386250 ~ 3387744 (-)
LOC120551162 NA non-coding downstream 62880 3343367 ~ 3345941 (-)
LOC120551207 NA non-coding downstream 84599 3313050 ~ 3324222 (-)
G1177 NA non-coding upstream 44217 3454512 ~ 3454994 (-)
LOC120565864 NA non-coding upstream 53166 3463461 ~ 3464806 (-)
G1183 NA non-coding upstream 60686 3470981 ~ 3480188 (-)
G1187 LOC104946033 non-coding upstream 78744 3489039 ~ 3489305 (-)
G1236 NA non-coding upstream 81699 3491994 ~ 3494758 (-)
LOC120551010 NA other downstream 95772 3305469 ~ 3313049 (-)
LOC120550734 LOC106675350 other downstream 134378 3269522 ~ 3274443 (-)
LOC120550954 NA other downstream 167324 3232624 ~ 3241497 (-)
G1008 tmem178a,LOC102307988 other downstream 430706 2975238 ~ 2978115 (-)
G1003 tmem178a other downstream 444501 2963740 ~ 2964320 (-)
LOC120555401 tmem63a,LOC106529083,LOC106934241,LOC103130112,LOC106936753,LOC102796925 other upstream 84592 3494887 ~ 3648473 (-)
G1240 NA other upstream 170923 3581218 ~ 3648230 (-)
G1242 NA other upstream 238393 3648688 ~ 3672538 (-)
dpy30 NA other upstream 249545 3659840 ~ 3664389 (-)
G1464 NA other upstream 935252 4345547 ~ 4346086 (-)

Expression


Co-expression Network