G1360


Basic Information

Item Value
gene id G1360
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4239243 ~ 4239738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1884
cttgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtttgtgtgtgtgtctgtgtgtgtctgtgtgtttgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgtgtgtttgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtttgtgtgtgtgtgtctgtgtgtttgtgtgtgtgtgtgt
>TU1885
gtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgtgtgtttgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtttgtgtgtgtgtgtctgtgtgtttgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1884 True 251 lncRNA 0.58 3 4239243 4239738
TU1885 False 144 lncRNA 0.53 2 4239509 4239738

Neighbor

gene id symbol gene type direction distance location
psen2 psen2,LOC100710620 coding upstream 583601 3647024 ~ 3655642 (+)
LOC120562172 NA coding upstream 671233 3564722 ~ 3568010 (+)
LOC120555395 NA coding upstream 749233 3488343 ~ 3490010 (+)
rrbp1b NA coding upstream 790750 3413425 ~ 3448493 (+)
LOC120550686 LOC106676715 coding upstream 866102 3364816 ~ 3373141 (+)
pgap4 NA coding downstream 4520 4244258 ~ 4247932 (+)
LOC120568266 NA coding downstream 13381 4253119 ~ 4269471 (+)
tpcn3 LOC103368820,LOC102314232 coding downstream 72869 4312607 ~ 4332900 (+)
rcor3 rcor3 coding downstream 259275 4499013 ~ 4517076 (+)
traf5 NA coding downstream 281361 4521099 ~ 4538660 (+)
G1324 NA non-coding upstream 121077 3883301 ~ 4118166 (+)
G1333 NA non-coding upstream 301579 3936749 ~ 3937664 (+)
LOC120569364 NA non-coding upstream 459240 3778708 ~ 3780003 (+)
G1233 NA non-coding upstream 493537 3745332 ~ 3745706 (+)
G1219 NA non-coding upstream 557314 3661852 ~ 3681929 (+)
G1361 NA non-coding downstream 8331 4248069 ~ 4251473 (+)
G1363 NA non-coding downstream 14605 4254343 ~ 4254686 (+)
G1367 NA non-coding downstream 95629 4335367 ~ 4335591 (+)
LOC120568418 LOC106675372 non-coding downstream 96964 4336702 ~ 4338765 (+)
G1383 NA non-coding downstream 180724 4420462 ~ 4424254 (+)
LOC120562910 NA other upstream 424673 3792746 ~ 3814570 (+)
G1191 NA other upstream 740139 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 759113 3468124 ~ 3480130 (+)
dzank1 NA other upstream 979485 3175601 ~ 3259758 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other upstream 1082105 3128089 ~ 3157138 (+)
pex6 pex6,LOC104944420,LOC104961583 other downstream 168700 4408438 ~ 4436086 (+)
G1487 LOC103369331 other downstream 215469 4455207 ~ 4460404 (+)
G1600 NA other downstream 738045 4977783 ~ 5038714 (+)
G1756 NA other downstream 978330 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 995608 5235346 ~ 5327917 (+)

Expression


Co-expression Network