pex6 (pex6,LOC104944420,LOC104961583)


Basic Information

Item Value
gene id pex6
gene name pex6,LOC104944420,LOC104961583
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4408438 ~ 4436086 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU1916
acacatgcatatatacacacacacacaaacggacacacccacagacatgcatatatatatatatatatatacacacacacacacacacacagaaacagacacacatacacacacacacccatgcatatacatacacacaaacgcacacacagaaacacacacacacatccattcacaaacacacacacacacagaaacgtagcaaaatatatttatttttgaactAAAACCTAGTAGTGTAAGTGTAGTCCTAAGTCTGGTGGTGTTGTTTCCATAAACCTCAGAAGAACCATGAATCACACGAGAGTCCCACTGAACCCAGACACATGATCGGTCATATTTTGGAATAGTtgtgtctctgtaaattatagagcgtggtctagacctactccatctgtaaagtctcctgagataactccttaTAGGGGATGTATAGGATTTGACACTATCAATAAAATAGAATTGAACTGAATATTTGATCAGATTTTACGGTGAAAGTCAGATTATAAACAGACTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTCGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTCGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTCGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGGGTCTCTGAACCGTCTCTGAGTCTCTGAACCGTCTCTGAGTCTCTTTGTGTCTTCTCAGGTTTGATAAGCTGGTGTACGTCGGGATCAACGTGGACCGGGAGTCCCAGCTGCAGGTTCTGCAGGCCATCCTCAGGAAGTTCCAGGTGGACTCTGCGGTGGACCTGCAGCAGGTGCTGGAGCGCTGCCCCGATCACATGACCGGCGCCGACCTGTACGCTCTGTGTTCAGACGCCATGACGGCTGCCATCAAGAGGAAGATCTCTCTCATCGACGGCggtcTGGACTCGGAGGACTCTCCTGTCCTGGTCTCCGTTGAGGATTTCTCTTCAGCGTTGGACAACTTCAAGCCGTCCGTTTCAGCCGAGGAGCTGCTGAGATACACAAACATTCAGCAGAAACTCGCTGCAAAGTAGAAACTGATGCTGATGACGATGTTCACTCTCCATATAATATACATAAAGACTCCCACAAAGGGCAAATTTAAAGGGCCAGTCACATCTGAAAAATCTATATTGTAAAATACTGTGAATGTAAATGTTGTACACAA
>XM_039815632.1
TTCTATTTTCCATATGATGTTGATGTAGTTCCTCCGGTCGTCCACCAGATGGCGGTGATGACGCGGCGccggaagaagaagaaaaagagaagaagacgCAGGTCCAAGATGGCGCAGGTGCAGGCTGAGTTGCGTTGTTTGGAAAGTTTCCCCTCGCGCCTGAGTCCTCTGgatgttttaatattaaaatcTCACTCAGATATAGTTTTCCAGAATGACACGGACCCACCGACCGTGCTCTTCACCCCGCAGCCGCCTCAGGGAACCACGAGCCCGGGCATTTTGCTGCGCGTTCACCCGACTACTGCGGAGGAGACCGGGGGTCCGAGCGCCGAGGCGGAGACTGCGGGAGCGCCGCCGTCCGGGGGCGCGGTGCGGCTGTTTGCCAGCCGGTTCTTCCTGCGGCACCACGGGCTCCAGAGTCTCGGCAGCAGCGGGACCGTCCGGGCTCTGGAGCCGGTCCCGCTGGACCGAGTGGTGCTGGGAGCCCGCAGCAGGCAGAGCCTCCGCTGGGCCGGAGCGGAGCGGTTCACCAGCGGGCTGCTGGAGCTCTGCGGCCCGGGACAGTGGCTGCTGGCCCGGCGGGGAGACCCGCTGCTGCTGCCCCGACACCCGCTGCTGGGAGAAGACCCGGGACAGGTGGAGCTGCTGGTGTTGGACTGCAGTCCTGTAACTCAGGGCCGGATTACGGCCGACACCGCTCTGCTTCTGACCGACTGCTGGGACCCAGCGGACGCGGCTGGCGGCGGCGCCACCCAGCCGCCTCTCAGACTGGGCGTGGACGCCCCCCTCCCACCGCTGTGCGTGTCGGACTTCGCTCACTACGCCGACGGCCTGGGCGGCGGGCGCTCTCTACTGGACAACCGCAGGCTGCTGGACTCGGGGTTCTCGGGCGTCCTGCGGGCTCTGGAGGGCCGTGTGGACGTCCGCGTGGTGGACACGCGGCGGTGGATCGGCGTCGGAGGGCACCGCGGCGGCAGCGTGGACCTCGGCGGCAGCGTGGACATCGACAGCTGCGTGGACATCGACAGCTGCGTGTTTGTGAGCAAACAGCTGTTGCTCCGGCTCGGCCTGTTCAACCACGAGTGGGTTAAAGTATCGCGGCCCGGCGCAGCCTCCAGACCGGAGAGTGAGGCTCGGGGGGGCGCCTGCAGACAGCGGCTGGTCTCGGTGCGCGTGGTGGATTTCAGCCAGAGTCCAGACCTGCAGGACCAGGACGAAGTGGGCTTCATATCGCCGGCTCTGTGGTTCAACATGGCCGACGGAGACGTGATGCCCGTCAACGGCTGCACGCTCAGGATCAAGAGGTGGCGAGCGTCTGCTCTGCCGGCGCTGGCCGGCGTGCATCGCTCCGACAGTTTCTGCCGCTCGGCGTCTCCGCCGTACGCCAGCGAGCTCCACGTCCAGCCGGTGGCGTCGCCGCTGTACAGCGGCCTCGGTTGCTACGACAACCTGCTGTCTGAGCACTTTAGCACGCCCAGACTGGTTGCCCAGGGAGACGTCCTGTCGGTTCCAGCTGCTAACCATCCAGACCTGCTGGAGAACAACTCAGAGGGGATACACAGgTGTCCAGTGCTGTTCTTCAGAGTTCAGAAGGTGTGTTcatctgcagagagagaagagggacaggaggaggaggctcACCTGGCCGACAGACTGCACACCTCACTCTACATGACGGCGTCTGCCGTTAGCAGCCCCGTCCCCTGCTGCCTCTATGAGGACAGCACGTCTCTGTGGAGCGCTCTGTCTCCTCCGGGCCTGGTCCAGACCGTGGAGCAGCTCTGCAGCATTATCCTGCCTCACCTGCAGCACAGCAGCCTGTCCGGTTGCACCGTCCTGCTCCACGGCCCGGCAGGAAGTGGTAAAGTGACGGCGGTCAGCGCGGCGAGCCGCAGACTCAACCTCCACCTGCTCAAGgtggacagtgtgagtgtgtgtgcagacacCCCTGCAGCCTCGGAGGTGAAGCTGAGCGCTGTGTTCCAGCGGGCCGCGGTGCTGCAGCCCTGCGTCCTGCTGCTCAGGAACCTGCAGCTTCTGCTGCGGCCTCGCGGCGGCCATGGCCAGGAGGACGCCAGGGTCCAGGCGGCGCTCTGCCAGCTGCTCCACAGCGCCCCCAGCAGtgtggtggtggtggcgaCGGTCTGCAGGCCCCGGGAGCTGTCTGCGGGGGTCGCGGCGGCCTTTGTCCACCAGGTGGCGCTGGAGAGTCCCACCGAGGAGCAGCGGTGTTCCGTGCTGCTCAGCCTGAGCCGAGAGCTTCCCCTGGGGAGAGACGTGGACCTGGAGAGGCTGTCCAGACTCACCGCGgGCTTTGTGTTGGGCGATCTGAGAGCTCTGCTGGTGGAGGCGGGCCGAGCTGCCCGCAGGAGGCTGGTTGACACCTGtgtcgGCTGGCGGGAGGAGGATCTGTGCTCCAGTGGAGTGAGCGTCCTGAACCAGGACTTCCTCTCGGCCCTGGAGACTCTGCAGGACGCCCAGTCGGCCGCCATCGGCGCCCCAAAGatcCCTTCAGTGCGCTGGGAGGACGTTGGCGGTCTGCAGCAGGTGAAGAAAGAGATCCTGGACACGGTGCAGCTTCCGCTGCAGCGGCCCGAGCTGCTGTCCCTGGGTCTGAACCGCACCGGCGTCCTGCTGTACGGGCCGCCGGGCACCGGGAAGACGCTGCTGGCCAAAGCGGTGGCCACCGAGTGCTCCATGACCTTCCTCAGtgtcaaAGGTCCGGAGCTCATCAACATGTACGTGGGTCAGAGCGAGGAGAACATCAGAGAAGtgttCTGCAGAGCGCGCTCAGCAGCCCCGTGTGTGGTCTTCTTCGATGAGCTGGACTCTCTGGCTCCCAGCAGGGGGCGTAGCGGAGACTCTGGGGGGGTGATGGACAGAGTGGTGTCCCAGCTGCTGGCCGAGCTCGACGCTCTGCACTCGGCTGCCGGCGTGTTTGTGATCGGAGCCACCAACCGGCCGGACCTGCTGGACCAATCACTGCTGAGGCCTGGCAGGTTTGATAAGCTGGTGTACGTCGGGATCAACGTGGACCGGGAGTCCCAGCTGCAGGTTCTGCAGGCCATCCTCAGGAAGTTCCAGGTGGACTCTGCGGTGGACCTGCAGCAGGTGCTGGAGCGCTGCCCCGATCACATGACCGGCGCCGACCTGTACGCTCTGTGTTCAGACGCCATGACGGCTGCCATCAAGAGGAAGATCTCTCTCATCGACGGCggtcTGGACTCGGAGGACTCTCCTGTCCTGGTCTCCGTTGAGGATTTCTCTTCAGCGTTGGACAACTTCAAGCCGTCCGTTTCAGCCGAGGAGCTGCTGAGATACACAAACATTCAGCAGAAACTCGCTGCAAAGTAGAAACTGATGCTGATGACGATGTTCACTCTCCATATAATATACATAAAGACTCCCACAAAGGGCAAATTTAAAGGGCCAGTCACATCTGAAAAATCTATATTGTAAAATACTGTGAATGTAAATGTTGTACACAAGAAGTTAATTTATAAAATTGTGAAATGTAATTAATAAATCCAAAAGTTAATGTTGGATGGAA
>XM_039815639.1
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggagtgAAAGCTGCAGCTCCACAGCGCCCTCTGCTGACCCACACAAAGTATTCATGGAGGGAAAGTATCTGCAGCTATTCCATTATTTTCCCTCAAAATATTCCAACCTTGTCTCGCAATATTACAACTTGTTTCTAGTAATATTCTAACTCTCCTtcctaagataattttttggggctttcccgcctttattttgacaggacagctaggtgagaaaggggagagagaaagggggaagaccataaacctctcagtatatgggcgcctgctctacccactgacccaacccggccacatatTCTAACTCTTTCCCTCAGAATATTCAAAGTCTTCTCCACTTCATTGAGCTAAAGTTCCTCCGGTCGTCCACCAGATGGCGGTGATGACGCGGCGccggaagaagaagaaaaagagaagaagacgCAGGTCCAAGATGGCGCAGGTGCAGGCTGAGTTGCGTTGTTTGGAAAGTTTCCCCTCGCGCCTGAGTCCTCTGgatgttttaatattaaaatcTCACTCAGATATAGTTTTCCAGAATGACACGGACCCACCGACCGTGCTCTTCACCCCGCAGCCGCCTCAGGGAACCACGAGCCCGGGCATTTTGCTGCGCGTTCACCCGACTACTGCGGAGGAGACCGGGGGTCCGAGCGCCGAGGCGGAGACTGCGGGAGCGCCGCCGTCCGGGGGCGCGGTGCGGCTGTTTGCCAGCCGGTTCTTCCTGCGGCACCACGGGCTCCAGAGTCTCGGCAGCAGCGGGACCGTCCGGGCTCTGGAGCCGGTCCCGCTGGACCGAGTGGTGCTGGGAGCCCGCAGCAGGCAGAGCCTCCGCTGGGCCGGAGCGGAGCGGTTCACCAGCGGGCTGCTGGAGCTCTGCGGCCCGGGACAGTGGCTGCTGGCCCGGCGGGGAGACCCGCTGCTGCTGCCCCGACACCCGCTGCTGGGAGAAGACCCGGGACAGGTGGAGCTGCTGGTGTTGGACTGCAGTCCTGTAACTCAGGGCCGGATTACGGCCGACACCGCTCTGCTTCTGACCGACTGCTGGGACCCAGCGGACGCGGCTGGCGGCGGCGCCACCCAGCCGCCTCTCAGACTGGGCGTGGACGCCCCCCTCCCACCGCTGTGCGTGTCGGACTTCGCTCACTACGCCGACGGCCTGGGCGGCGGGCGCTCTCTACTGGACAACCGCAGGCTGCTGGACTCGGGGTTCTCGGGCGTCCTGCGGGCTCTGGAGGGCCGTGTGGACGTCCGCGTGGTGGACACGCGGCGGTGGATCGGCGTCGGAGGGCACCGCGGCGGCAGCGTGGACCTCGGCGGCAGCGTGGACATCGACAGCTGCGTGGACATCGACAGCTGCGTGTTTGTGAGCAAACAGCTGTTGCTCCGGCTCGGCCTGTTCAACCACGAGTGGGTTAAAGTATCGCGGCCCGGCGCAGCCTCCAGACCGGAGAGTGAGGCTCGGGGGGGCGCCTGCAGACAGCGGCTGGTCTCGGTGCGCGTGGTGGATTTCAGCCAGAGTCCAGACCTGCAGGACCAGGACGAAGTGGGCTTCATATCGCCGGCTCTGTGGTTCAACATGGCCGACGGAGACGTGATGCCCGTCAACGGCTGCACGCTCAGGATCAAGAGGTGGCGAGCGTCTGCTCTGCCGGCGCTGGCCGGCGTGCATCGCTCCGACAGTTTCTGCCGCTCGGCGTCTCCGCCGTACGCCAGCGAGCTCCACGTCCAGCCGGTGGCGTCGCCGCTGTACAGCGGCCTCGGTTGCTACGACAACCTGCTGTCTGAGCACTTTAGCACGCCCAGACTGGTTGCCCAGGGAGACGTCCTGTCGGTTCCAGCTGCTAACCATCCAGACCTGCTGGAGAACAACTCAGAGGGGATACACAGgTGTCCAGTGCTGTTCTTCAGAGTTCAGAAGGTGTGTTcatctgcagagagagaagagggacaggaggaggaggctcACCTGGCCGACAGACTGCACACCTCACTCTACATGACGGCGTCTGCCGTTAGCAGCCCCGTCCCCTGCTGCCTCTATGAGGACAGCACGTCTCTGTGGAGCGCTCTGTCTCCTCCGGGCCTGGTCCAGACCGTGGAGCAGCTCTGCAGCATTATCCTGCCTCACCTGCAGCACAGCAGCAGCCTGTCCGGTTGCACCGTCCTGCTCCACGGCCCGGCAGGAAGTGGTAAAGTGACGGCGGTCAGCGCGGCGAGCCGCAGACTCAACCTCCACCTGCTCAAGgtggacagtgtgagtgtgtgtgcagacacCCCTGCAGCCTCGGAGGTGAAGCTGAGCGCTGTGTTCCAGCGGGCCGCGGTGCTGCAGCCCTGCGTCCTGCTGCTCAGGAACCTGCAGCTTCTGCTGCGGCCTCGCGGCGGCCATGGCCAGGAGGACGCCAGGGTCCAGGCGGCGCTCTGCCAGCTGCTCCACAGCGCCCCCAGCAGtgtggtggtggtggcgaCGGTCTGCAGGCCCCGGGAGCTGTCTGCGGGGGTCGCGGCGGCCTTTGTCCACCAGGTGGCGCTGGAGAGTCCCACCGAGGAGCAGCGGTGTTCCGTGCTGCTCAGCCTGAGCCGAGAGCTTCCCCTGGGGAGAGACGTGGACCTGGAGAGGCTGTCCAGACTCACCGCGgGCTTTGTGTTGGGCGATCTGAGAGCTCTGCTGGTGGAGGCGGGCCGAGCTGCCCGCAGGAGGCTGGTTGACACCTGtgtcgGCTGGCGGGAGGAGGATCTGTGCTCCAGTGGAGTGAGCGTCCTGAACCAGGACTTCCTCTCGGCCCTGGAGACTCTGCAGGACGCCCAGTCGGCCGCCATCGGCGCCCCAAAGatcCCTTCAGTGCGCTGGGAGGACGTTGGCGGTCTGCAGCAGGTGAAGAAAGAGATCCTGGACACGGTGCAGCTTCCGCTGCAGCGGCCCGAGCTGCTGTCCCTGGGTCTGAACCGCACCGGCGTCCTGCTGTACGGGCCGCCGGGCACCGGGAAGACGCTGCTGGCCAAAGCGGTGGCCACCGAGTGCTCCATGACCTTCCTCAGtgtcaaAGGTCCGGAGCTCATCAACATGTACGTGGGTCAGAGCGAGGAGAACATCAGAGAAGtgttCTGCAGAGCGCGCTCAGCAGCCCCGTGTGTGGTCTTCTTCGATGAGCTGGACTCTCTGGCTCCCAGCAGGGGGCGTAGCGGAGACTCTGGGGGGGTGATGGACAGAGTGGTGTCCCAGCTGCTGGCCGAGCTCGACGCTCTGCACTCGGCTGCCGGCGTGTTTGTGATCGGAGCCACCAACCGGCCGGACCTGCTGGACCAATCACTGCTGAGGCCTGGCAGGTTTGATAAGCTGGTGTACGTCGGGATCAACGTGGACCGGGAGTCCCAGCTGCAGGTTCTGCAGGCCATCCTCAGGAAGTTCCAGGTGGACTCTGCGGTGGACCTGCAGCAGGTGCTGGAGCGCTGCCCCGATCACATGACCGGCGCCGACCTGTACGCTCTGTGTTCAGACGCCATGACGGCTGCCATCAAGAGGAAGATCTCTCTCATCGACGGCggtcTGGACTCGGAGGACTCTCCTGTCCTGGTCTCCGTTGAGGATTTCTCTTCAGCGTTGGACAACTTCAAGCCGTCCGTTTCAGCCGAGGAGCTGCTGAGATACACAAACATTCAGCAGAAACTCGCTGCAAAGTAGAAACTGATGCTGATGACGATGTTCACTCTCCATATAATATACATAAAGACTCCCACAAAGGGCAAATTTAAAGGGCCAGTCACATCTGAAAAATCTATATTGTAAAATACTGTGAATGTAAATGTTGTACACAAGAAGTTAATTTATAAAATTGTGAAATGTAATTAATAAATCCAAAAGTTAATGTTGGATGGAA

Function

symbol description
pex6 Predicted to enable ATP hydrolysis activity. Predicted to be involved in protein import into peroxisome matrix. Predicted to be active in cytosol and peroxisomal membrane. Human ortholog(s) of this gene implicated in Heimler syndrome 2; peroxisomal biogenesis disorder; and peroxisome biogenesis disorder 4A. Orthologous to human PEX6 (peroxisomal biogenesis factor 6).

NR:

description
peroxisome biogenesis factor 6

GO: NA

KEGG:

id description
K13339 PEX6, PXAAA1; peroxin-6

RNA

RNA id representative length rna type GC content exon number start site end site
TU1916 False 1508 TUCP 0.45 3 4433376 4436024
XM_039815632.1 False 3553 mRNA 0.63 19 4409259 4436086
XM_039815639.1 True 3940 mRNA 0.61 20 4408438 4436086

Neighbor

gene id symbol gene type direction distance location
tpcn3 LOC103368820,LOC102314232 coding upstream 75538 4312607 ~ 4332900 (+)
LOC120568266 NA coding upstream 138967 4253119 ~ 4269471 (+)
pgap4 NA coding upstream 160506 4244258 ~ 4247932 (+)
psen2 psen2,LOC100710620 coding upstream 752796 3647024 ~ 3655642 (+)
LOC120562172 NA coding upstream 840428 3564722 ~ 3568010 (+)
rcor3 rcor3 coding downstream 62927 4499013 ~ 4517076 (+)
traf5 NA coding downstream 85013 4521099 ~ 4538660 (+)
zgc:172076 NA coding downstream 347267 4783353 ~ 4806707 (+)
LOC120563657 NA coding downstream 420600 4856686 ~ 4939470 (+)
LOC120563603 stxbp6 coding downstream 511572 4947658 ~ 4949112 (+)
LOC120568418 LOC106675372 non-coding upstream 69673 4336702 ~ 4338765 (+)
G1367 NA non-coding upstream 72847 4335367 ~ 4335591 (+)
G1363 NA non-coding upstream 153752 4254343 ~ 4254686 (+)
G1361 NA non-coding upstream 156965 4248069 ~ 4251473 (+)
G1360 NA non-coding upstream 168700 4239243 ~ 4239738 (+)
G1385 NA non-coding downstream 7698 4443784 ~ 4450576 (+)
G1489 NA non-coding downstream 33720 4469806 ~ 4470109 (+)
G1493 NA non-coding downstream 84086 4520172 ~ 4520486 (+)
LOC120563678 NA non-coding downstream 272118 4708204 ~ 4710879 (+)
G1562 NA non-coding downstream 273194 4709280 ~ 4709697 (+)
LOC120562910 NA other upstream 593868 3792746 ~ 3814570 (+)
G1191 NA other upstream 909334 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 928308 3468124 ~ 3480130 (+)
dzank1 NA other upstream 1148680 3175601 ~ 3259758 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other upstream 1251300 3128089 ~ 3157138 (+)
G1487 LOC103369331 other downstream 19121 4455207 ~ 4460404 (+)
G1600 NA other downstream 541697 4977783 ~ 5038714 (+)
G1756 NA other downstream 781982 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 799260 5235346 ~ 5327917 (+)
G1775 NA other downstream 936531 5372617 ~ 5374907 (+)

Expression


Co-expression Network