G1761


Basic Information

Item Value
gene id G1761
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5224793 ~ 5225428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2412
cacacagtcttaccaaatttacaattagccatacattttcgtaaaacggcccatatttgagctttatgtagttgatttctcgctgaatattaatgagcataccatatttggaagaaaagctcttgttccaaatagagccatactcacagggtagttaagggcctaataaaatggcattcgggcaattttcagcccaaccaatgttacataccccattaggagaccttaaggaacagtgtaaaataccctatataatcattctatcacccctttaacttcttcaggacatgaacacctgtttcctgggtgaaggtcttgtgttttctccttaacttctccaggacatgaactctgccccctccccccccttgacagctctgtgttttaggagccaaacctcccccccaacctcctccctatgAGGATCTTCAcactcttatacagcagcagtcaacatGCTGCCGACAGTCATACATACTAGTTATAGGG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU2412 True 489 lncRNA 0.41 2 5224793 5225428

Neighbor

gene id symbol gene type direction distance location
LOC120563443 NA coding upstream 27676 5180196 ~ 5197117 (+)
LOC120563472 NA coding upstream 45051 5158881 ~ 5179742 (+)
LOC120563603 stxbp6 coding upstream 275681 4947658 ~ 4949112 (+)
LOC120563657 NA coding upstream 285323 4856686 ~ 4939470 (+)
zgc:172076 NA coding upstream 418086 4783353 ~ 4806707 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding downstream 135923 5361351 ~ 5371770 (+)
ndufaf5 ndufaf5 coding downstream 275604 5501032 ~ 5518108 (+)
LOC120564466 NA coding downstream 364241 5589669 ~ 5591008 (+)
LOC120564476 NA coding downstream 381026 5606454 ~ 5607801 (+)
LOC120563910 NA coding downstream 564869 5790297 ~ 5803234 (+)
G1612 NA non-coding upstream 152858 5067789 ~ 5071935 (+)
LOC120563689 NA non-coding upstream 199871 5024030 ~ 5024922 (+)
G1582 NA non-coding upstream 381502 4838096 ~ 4843291 (+)
G1578 LOC103374759 non-coding upstream 387372 4821739 ~ 4837421 (+)
LOC120563678 NA non-coding upstream 513914 4708204 ~ 4710879 (+)
G1771 NA non-coding downstream 57519 5282947 ~ 5285344 (+)
G1759 NA non-coding downstream 59388 5284816 ~ 5296665 (+)
G1780 NA non-coding downstream 93354 5318782 ~ 5319304 (+)
G1782 NA non-coding downstream 98808 5324236 ~ 5324489 (+)
G1773 LOC108251774,LOC106535048,LOC107394211 non-coding downstream 109919 5335347 ~ 5340471 (+)
G1756 NA other upstream 2049 5218068 ~ 5222744 (+)
G1600 NA other upstream 186079 4977783 ~ 5038714 (+)
G1487 LOC103369331 other upstream 764389 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 788707 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 1410223 3792746 ~ 3814570 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 9918 5235346 ~ 5327917 (+)
G1775 NA other downstream 147189 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 161965 5387393 ~ 5471409 (+)
snrpb2 snrpb2 other downstream 651119 5876547 ~ 5916374 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 1160173 6385601 ~ 6402640 (+)

Expression


Co-expression Network