G714 (LOC103375176,LOC105920176,LOC100706186,LOC101468385)


Basic Information

Item Value
gene id G714
gene name LOC103375176,LOC105920176,LOC100706186,LOC101468385
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2307285 ~ 2346048 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU983
gtgtgtgttatatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttctgtgtgtgtctttgtgtgttatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtatcttactGAACATCATCTCCAGTCTCATCAAGCAGCCCACAAAGTTATCAAAGTCGATGGTCATGTCTGGCTCGGAGTACCGGGCCACCAGCAGCTGGTAGATGCTGTTGTTGAGGGTGAAACCTGCGTCTTTGAAGGCGACTCTCATCTCAGGAGTACTCATGGTCCCCGAGTTATCTAGGTCATTCTTCTTGTAGAgggtCAGATATGTCTGAACTTTCTTCCACAGCGTGGCGAACTCTCCGATGCCCAGCTTGCCGTTGCCGCTGTCGTCCATCAGGTTCACCATGACCCGGCACGTCTCCAAGCTGAAGCCGTCTGTCTTAATGTCCGTTCGTTTGGAAACGATCTTGTTCATGATGGTCTGGAGC
>TU985
gtgtgtgttatatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttctctgggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctttgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgt
>TU986
gtgtgtgttatatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttctgtgtgtgtctttgtgtgttatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatatgtgtgtgtctatatgtgtgtgtgtgtgtgtgtgtgtctatatgtgt

Function

NR:

description
PREDICTED: calpain-2 catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU983 True 522 TUCP 0.41 6 2307285 2312087
TU985 False 261 lncRNA 0.48 2 2307285 2344275
TU986 False 188 lncRNA 0.56 3 2307285 2346048

Neighbor

gene id symbol gene type direction distance location
mrps28 mrps28 coding upstream 39662 2266855 ~ 2267623 (+)
mtif2 mtif2 coding upstream 60351 2228163 ~ 2246934 (+)
LOC120566049 NA coding upstream 87432 2211994 ~ 2219853 (+)
LOC120566037 NA coding upstream 102385 2202527 ~ 2204900 (+)
LOC120561330 NA coding upstream 105885 2197974 ~ 2201400 (+)
LOC120561353 LOC102083160 coding downstream 16684 2362732 ~ 2394287 (+)
LOC120566159 NA coding downstream 226932 2572980 ~ 2584262 (+)
LOC120561808 srf,LOC103372093 coding downstream 512456 2858504 ~ 2881120 (+)
eif4a3 eif4a3 coding downstream 536875 2882923 ~ 2891005 (+)
tmem178 tmem178a,LOC102307988 coding downstream 592049 2938097 ~ 2977429 (+)
G701 NA non-coding upstream 52951 2252046 ~ 2254334 (+)
G690 NA non-coding upstream 134815 2170948 ~ 2172470 (+)
G684 NA non-coding upstream 176501 2130256 ~ 2130784 (+)
G676 NA non-coding upstream 177869 2082828 ~ 2129416 (+)
G675 NA non-coding upstream 200548 2067832 ~ 2106737 (+)
G725 NA non-coding downstream 1120 2347168 ~ 2361839 (+)
G724 NA non-coding downstream 8886 2354934 ~ 2361333 (+)
G731 NA non-coding downstream 39107 2385155 ~ 2385544 (+)
G857 NA non-coding downstream 225244 2571292 ~ 2571500 (+)
G865 NA non-coding downstream 242673 2588721 ~ 2589076 (+)
LOC120566000 NA other upstream 340030 1946145 ~ 1967255 (+)
G369 NA other upstream 387461 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other upstream 427739 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other upstream 470825 1746571 ~ 1836460 (+)
G355 NA other upstream 770588 1536215 ~ 1536697 (+)
LOC120566146 LOC107082675,LOC108251143,LOC103383281 other downstream 212828 2558876 ~ 2570454 (+)
G879 NA other downstream 280195 2626243 ~ 2700975 (+)
LOC120567073 sos1 other downstream 648981 2995029 ~ 3080190 (+)
LOC120567079 NA other downstream 722350 3068398 ~ 3071473 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other downstream 782041 3128089 ~ 3157138 (+)

Expression


Co-expression Network