LOC120563472


Basic Information

Item Value
gene id LOC120563472
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5158881 ~ 5179742 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807646.1
CAGTCTGTAGGAGACTCAACAAGACTTCAGTCAGGGAAGAGACAGCTCCTTTTACGTGGAGCCACAATGGCACACGAGGTCCTCTTAAATGCTCTGGACGAACTTGGAGAAGACGAATTTCAGCGTTTCAAGTGGATCCTGAAAGAGGAACGCCTGAAAGACTCGTCAACCATCCCATGGAGCAAGCTGGAGAATGCAAAGACGTTGGACACAGTTCGTCTGATGATCCAGACCTACACCCCTCCTGAAGCTGTGGAGCTGACCAATAAGGTCTTAAAGAAGATCAACAGGAATGATCTGGTGCAGAGTTCGTCAGCTAGCAGCTCAGGGACAAAAGctcctcagcagcagccactggtccagtttgctgctaacacTGACAATGAAGAACCAAGCAGCAGCCATGAGCCCCAAACTCCATACTGGGCAGATCCAGGACTCATCTTACATTCCAAAACAAACCTTCAATCAAACCTCCATGATACATTTATGTGTGCGCAGGAAGGGTGGGCACAGAAGAAGGATGAGCAGCATCTGGATGACATCTACACACATCTGTACGTCGCAGCGGGGGGTGACATACAGCTTAACACAGAACATGAGTTCTGGCAGATTGAGGCAGTGGCAGTGAAGCCAGTAGGAACAGAGACAACAATTAAACCTTGTGACATGTTCAAACCCCCCTCTGGAAGATATAAACCAATAAGAACAGTGCTGACCAATGGAATCGCAGGAATTGGCAAAACATTTCTTGTGCGCAAGTTTGTGTTGGACTGGGCTGAAGGAAGAGCCAATCAAGATGTGCatctcatttttcttttcacctTCCGCAAGCTGAATTTAAAGAAGGGGGGAAAGTTTTCTTTGGCAGAGCTTATTCATGAATGTATCACAGAGACTAAAGACATCAAGGAAGACGTCCTGAATTACATCTTTACAGCTCTGCAGTCATCAGGAAACACCAACTATGACAAGAGTGAATTCAaacttctgtttgttttggatgGACTGGATGAGAGCCGCCTTGATCTGGACTGCTCTACCAATGAAAATCAGGCAGTTAAATTTGATGTGACAACGCCGACCTCAGTGGACAAGCTGCTGACGAACCTCATCAAGAAGAAACTGCTGCCCTCTGCTCGCCTATGGATAACAACCCGACCAGCAGCAGCAAATCAGATCCATTCTGATTTTGTTGACATCATGACAGAGGTAAGAGGGTTTACCGACCCACAGAAGGaagagtacttcaggaagagattcagagatgaagagcaggccagcagaatcatctcccacatcaagacaacacgaagcctccacatcatgtgccacatcccggtcttctgctggatcactgctatgGTTCTGGAGGAAGTGATGAaaaccagagagggaggagagttgcccaagaccctgactgagatgtatgCAGAATTCCTGGTGTTTCAGATTCATCAGACAAAAAAGAAGTATGACCGAAAAAAGTGCATTCAGTACATTGAGTCATTAGCTAAACTGGCTTACCATCAGTTGGAAAagggcaacctgatcttctatgagAAAGATCTCAAAGAGAGTGGCATTGACGTCAGTGGAGCGTCGGTGTGCTCAGGAGTGTTCACGGAGATCTTCAAAGAGGAACGTCGGAGAAAGAATGAGGACAAGATGTTTAGCTTCATCCATCTGACTGTTCAGGAGTtcctggctgctcttcatgtagAGAGGGCAGTCATTAACAGAAACAAGAATGTGATGTCTGAGCCAGGCCAAAGTTATGGCGAACAAATGCGAATGGTTTTCAGCAGAACATCTATGACAGATGTCCACAGGTTTGCTATTGACAAGGCCTTgcagagtccaaatggacacttGGACctgttcctccgcttcctcctgggtctttcactggAGACAAATCACAAAGACCTACGAGGTCTGATGAAGAAAAGAAGCTCAGAGACAAATCAGGATACAGTCGAGTACATCAAGACGaagatcagtgagaatctgtctCCAgagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttCTCTAGTGGAGGAAATCCAACATTACCTAAGTTCAGGAATTCTCTCTAcagataaactgtctcctgctcaatGGTCAGCactggtcttcatcttactgaCATCAGAAAATGACCTAgatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctGCTGAATGGCTGTAATCTGACGGAGaaaagctgtgaagctctgtcctcagttctcagctcgcagccctctagtctgagagacctggacctgagtaacaacgaactgaaggattcaggagggaagctgctCTTtgctggactgaagagtccaaaCTGGAaactggaaactctcagGTTGAGTCAAACCAGGCTTACGAACAAATGCTGTCAGGATCTCTcatcagttctcagctcccagtcctcctgtctgaaagagctggacctgagtaacaacacaCTGCAGGACTCAGGAGTGGAATTGATCTCTGCTGGACTAAAGAGTCCACACTGTACACTGGAGACTTTCAGGCTGAGTGGCTGTAGTCTGTTGGAGAGAAGCTGTGAAAATTTGTCTGCAGTTCTCATCTcacagtcctctagtctgagagagctggattTGAGTAACAATGACCTAGAGGACTCAGGAGCAACGCTGCTCTTTGCTGGACTGCAGAGTCCACATTGtacactggagactctcaggtTGATTCAAACCAGGCTCACAAAGAAATGCTGTCAGGATCTCTCATCACTTCTCAGCTCCGAGTCCTCTGGTCTGAGAGAGCtagacctgagtaacaacgatctgcaggattcaggagtggaGCTGCTGTCTGCTGGATTGGAGAGTCAACAATGTAcgctggagactctcagtctgtcaggctgtctggtCACAGATGAAGGCTGTacttctctggcctcagctctgagctccaacccctcccatatGAGAGTGCTGGACCTGAGatacaatcatccaggagactcaggagggAAGCTGCTGTCCTCTGGACTGGAGGATCCAGAATGgagactggaaactctcagCCTGGAACATGGTGGAGAGCAGAGGCTGAAACCTGGTCTgaggaagtatgtctgtgaactcacactggacacaaacaccatgaacacacacctcCGACTCTCTCataacaacaggaaggtgacagcAGTGAGAAAGAGgcagccatatcctgatcacccagagaggtttgactactggtggcagctgctgtgtagagatggtctgactggaaGCGGTTACTGGGAGGTTGACTGGAGAGGAGAGGTTGATATATCattgagttacagaggaatcagcaggAAAGGAAACAAAGCTGACTGTGAGTTTGGAGGGAAtaatcagtcctggagtctgagaTGCTCTGATGTTGAAGGTTACTCTGTCAGTCACAATGACAGAAGTACacgcctctcctcctctccatcctctTCTGTCTCTtacagagtagcagtgtatgtggactgtcctgctggctctctgtcttTCTACAGAGTCTCCTCTGACAcgctgatccacctccacaccttccaCACCACATTTACTGAACCTCTTTATCCTGGATTTGGGTTTTTGTTGCCTGGTTCActgtctctgtgttctctgtagCAGGGAGAGTCTCTTCCTGTGCAAAGAAATACTCACACTGCTGACAAACATATACaatctttttgtctctttgtctctttaaaaccatctgtcctctctgtctaaAATGTGTACCTGATGGTCTTCAAAAGAGTGTTCTTTATTCTTCAGATGTGAGTAAACTGCTGAGTCTAGACCTGAGGCGTCGGTCCTTCTGTGTTGGGCGTCGGTCCTTCTGTGTTGGGCTATGCGTTTGTGTAAcggttgttttgtttgtctgtggatttctctgtgtctgtggaTGCCTCCCTGCATTGGACAGCAGTTTGAAAGAGGTACACCTGGGTAGAGAAACCGTTGCTTAACAGAGAAGGAGGTCTGCGACACCACTTATTCTCCACTTAAAATGCTGTACTTTAATCTCTTTCCAGGAAACTAATCAACTAAGCCTTATGTGAGAATGCCAACGATGGTTGTTCAGACTTGGCCTCGGGTGTCTCATATGACTTAGTCTCttattgccagctctatctccacagcgctgtggagtaaggtctggctgtAACACAGATGATTTctgataggagaaaaaaactctctgggttgtttgcatttctttaaaccaatcacaatcatcttgggagGTGCTAAGCTCCATTCTTGAAGTTTGTTGCTTTAtcccccctcaaagtgatcaatgcttcACCAATGGACCATATATTGTATACCTGTAAAGCGCTGTAACATGAATAGTCTATAGTGCGATAGAACAATACAATCCGAGCAGCTGTTGCTGGTtttatttagccgctacagagctccgggacacCGTTTACCAGCGGCAGTTTTTTAGCTGCCAATAGGTGATTGCGAGCCAGCTACAGGCACCTCCAGATGATGTTCCTTTCACCCCCCTCTgccttttttcacaaattgtaCCCTGGTTATATATGATGTCAATCATTGAAAGTTGAAATGTAATTTGAGTATTTTACAAATGTACTAAACTCCTACATTTCAAGTGTAATctacatcaatcaatcaatcatcagATGAATGGTTGGGAACCCTTTTCAAACAGAGGGGGCAAATATGAGGACTAAAAGTAACTGGAAACATCAACATAAACTTAAAAAGGCATCATGTgtaatattttgttgtataatacAGTTCtgtcaacacataaaacaaattGATCTCTGAAATCTCTTTACTTCTTCTATCCATCTTTGTACCATGGTTTGTTTTCTGCGAGTAAAATCTTAAGTCTA
>XM_039807655.1
GTTACCTTAGCTGCCCGGGTTGAGAACCATCCACCATTCTTCGTCCTGCCTTGCAATCACCTCTCACAACGTGGACGAGGGGTTGGGTTTTGAGATCCAGGACTCATCTTACATTCCAAAACAAACCTTCAATCAAACCTCCATGATACATTTATGTGTGCGCAGGAAGGGTGGGCACAGAAGAAGGATGAGCAGCATCTGGATGACATCTACACACATCTGTACGTCGCAGCGGGGGGTGACATACAGCTTAACACAGAACATGAGTTCTGGCAGATTGAGGCAGTGGCAGTGAAGCCAGTAGGAACAGAGACAACAATTAAACCTTGTGACATGTTCAAACCCCCCTCTGGAAGATATAAACCAATAAGAACAGTGCTGACCAATGGAATCGCAGGAATTGGCAAAACATTTCTTGTGCGCAAGTTTGTGTTGGACTGGGCTGAAGGAAGAGCCAATCAAGATGTGCatctcatttttcttttcacctTCCGCAAGCTGAATTTAAAGAAGGGGGGAAAGTTTTCTTTGGCAGAGCTTATTCATGAATGTATCACAGAGACTAAAGACATCAAGGAAGACGTCCTGAATTACATCTTTACAGCTCTGCAGTCATCAGGAAACACCAACTATGACAAGAGTGAATTCAaacttctgtttgttttggatgGACTGGATGAGAGCCGCCTTGATCTGGACTGCTCTACCAATGAAAATCAGGCAGTTAAATTTGATGTGACAACGCCGACCTCAGTGGACAAGCTGCTGACGAACCTCATCAAGAAGAAACTGCTGCCCTCTGCTCGCCTATGGATAACAACCCGACCAGCAGCAGCAAATCAGATCCATTCTGATTTTGTTGACATCATGACAGAGGTAAGAGGGTTTACCGACCCACAGAAGGaagagtacttcaggaagagattcagagatgaagagcaggccagcagaatcatctcccacatcaagacaacacgaagcctccacatcatgtgccacatcccggtcttctgctggatcactgctatgGTTCTGGAGGAAGTGATGAaaaccagagagggaggagagttgcccaagaccctgactgagatgtatgCAGAATTCCTGGTGTTTCAGATTCATCAGACAAAAAAGAAGTATGACCGAAAAAAGTGCATTCAGTACATTGAGTCATTAGCTAAACTGGCTTACCATCAGTTGGAAAagggcaacctgatcttctatgagAAAGATCTCAAAGAGAGTGGCATTGACGTCAGTGGAGCGTCGGTGTGCTCAGGAGTGTTCACGGAGATCTTCAAAGAGGAACGTCGGAGAAAGAATGAGGACAAGATGTTTAGCTTCATCCATCTGACTGTTCAGGAGTtcctggctgctcttcatgtagAGAGGGCAGTCATTAACAGAAACAAGAATGTGATGTCTGAGCCAGGCCAAAGTTATGGCGAACAAATGCGAATGGTTTTCAGCAGAACATCTATGACAGATGTCCACAGGTTTGCTATTGACAAGGCCTTgcagagtccaaatggacacttGGACctgttcctccgcttcctcctgggtctttcactggAGACAAATCACAAAGACCTACGAGGTCTGATGAAGAAAAGAAGCTCAGAGACAAATCAGGATACAGTCGAGTACATCAAGACGaagatcagtgagaatctgtctCCAgagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttCTCTAGTGGAGGAAATCCAACATTACCTAAGTTCAGGAATTCTCTCTAcagataaactgtctcctgctcaatGGTCAGCactggtcttcatcttactgaCATCAGAAAATGACCTAgatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctGCTGAATGGCTGTAATCTGACGGAGaaaagctgtgaagctctgtcctcagttctcagctcgcagccctctagtctgagagacctggacctgagtaacaacgaactgaaggattcaggagggaagctgctCTTtgctggactgaagagtccaaaCTGGAaactggaaactctcagGTTGAGTCAAACCAGGCTTACGAACAAATGCTGTCAGGATCTCTcatcagttctcagctcccagtcctcctgtctgaaagagctggacctgagtaacaacacaCTGCAGGACTCAGGAGTGGAATTGATCTCTGCTGGACTAAAGAGTCCACACTGTACACTGGAGACTTTCAGGCTGAGTGGCTGTAGTCTGTTGGAGAGAAGCTGTGAAAATTTGTCTGCAGTTCTCATCTcacagtcctctagtctgagagagctggattTGAGTAACAATGACCTAGAGGACTCAGGAGCAACGCTGCTCTTTGCTGGACTGCAGAGTCCACATTGtacactggagactctcaggtTGATTCAAACCAGGCTCACAAAGAAATGCTGTCAGGATCTCTCATCACTTCTCAGCTCCGAGTCCTCTGGTCTGAGAGAGCtagacctgagtaacaacgatctgcaggattcaggagtggaGCTGCTGTCTGCTGGATTGGAGAGTCAACAATGTAcgctggagactctcagtctgtcaggctgtctggtCACAGATGAAGGCTGTacttctctggcctcagctctgagctccaacccctcccatatGAGAGTGCTGGACCTGAGatacaatcatccaggagactcaggagggAAGCTGCTGTCCTCTGGACTGGAGGATCCAGAATGgagactggaaactctcagCCTGGAACATGGTGGAGAGCAGAGGCTGAAACCTGGTCTgaggaagtatgtctgtgaactcacactggacacaaacaccatgaacacacacctcCGACTCTCTCataacaacaggaaggtgacagcAGTGAGAAAGAGgcagccatatcctgatcacccagagaggtttgactactggtggcagctgctgtgtagagatggtctgactggaaGCGGTTACTGGGAGGTTGACTGGAGAGGAGAGGTTGATATATCattgagttacagaggaatcagcaggAAAGGAAACAAAGCTGACTGTGAGTTTGGAGGGAAtaatcagtcctggagtctgagaTGCTCTGATGTTGAAGGTTACTCTGTCAGTCACAATGACAGAAGTACacgcctctcctcctctccatcctctTCTGTCTCTtacagagtagcagtgtatgtggactgtcctgctggctctctgtcttTCTACAGAGTCTCCTCTGACAcgctgatccacctccacaccttccaCACCACATTTACTGAACCTCTTTATCCTGGATTTGGGTTTTTGTTGCCTGGTTCActgtctctgtgttctctgtagCAGGGAGAGTCTCTTCCTGTGCAAAGAAATACTCACACTGCTGACAAACATATACaatctttttgtctctttgtctctttaaaaccatctgtcctctctgtctaaAATGTGTACCTGATGGTCTTCAAAAGAGTGTTCTTTATTCTTCAGATGTGAGTAAACTGCTGAGTCTAGACCTGAGGCGTCGGTCCTTCTGTGTTGGGCGTCGGTCCTTCTGTGTTGGGCTATGCGTTTGTGTAAcggttgttttgtttgtctgtggatttctctgtgtctgtggaTGCCTCCCTGCATTGGACAGCAGTTTGAAAGAGGTACACCTGGGTAGAGAAACCGTTGCTTAACAGAGAAGGAGGTCTGCGACACCACTTATTCTCCACTTAAAATGCTGTACTTTAATCTCTTTCCAGGAAACTAATCAACTAAGCCTTATGTGAGAATGCCAACGATGGTTGTTCAGACTTGGCCTCGGGTGTCTCATATGACTTAGTCTCttattgccagctctatctccacagcgctgtggagtaaggtctggctgtAACACAGATGATTTctgataggagaaaaaaactctctgggttgtttgcatttctttaaaccaatcacaatcatcttgggagGTGCTAAGCTCCATTCTTGAAGTTTGTTGCTTTAtcccccctcaaagtgatcaatgcttcACCAATGGACCATATATTGTATACCTGTAAAGCGCTGTAACATGAATAGTCTATAGTGCGATAGAACAATACAATCCGAGCAGCTGTTGCTGGTtttatttagccgctacagagctccgggacacCGTTTACCAGCGGCAGTTTTTTAGCTGCCAATAGGTGATTGCGAGCCAGCTACAGGCACCTCCAGATGATGTTCCTTTCACCCCCCTCTgccttttttcacaaattgtaCCCTGGTTATATATGATGTCAATCATTGAAAGTTGAAATGTAATTTGAGTATTTTACAAATGTACTAAACTCCTACATTTCAAGTGTAATctacatcaatcaatcaatcatcagATGAATGGTTGGGAACCCTTTTCAAACAGAGGGGGCAAATATGAGGACTAAAAGTAACTGGAAACATCAACATAAACTTAAAAAGGCATCATGTgtaatattttgttgtataatacAGTTCtgtcaacacataaaacaaattGATCTCTGAAATCTCTTTACTTCTTCTATCCATCTTTGTACCATGGTTTGTTTTCTGCGAGTAAAATCTTAAGTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807646.1 True 4976 mRNA 0.46 11 5158881 5179742
XM_039807655.1 False 4640 mRNA 0.46 9 5161607 5179742

Neighbor

gene id symbol gene type direction distance location
LOC120563603 stxbp6 coding upstream 209769 4947658 ~ 4949112 (+)
LOC120563657 NA coding upstream 219411 4856686 ~ 4939470 (+)
zgc:172076 NA coding upstream 352174 4783353 ~ 4806707 (+)
traf5 NA coding upstream 620221 4521099 ~ 4538660 (+)
rcor3 rcor3 coding upstream 641805 4499013 ~ 4517076 (+)
LOC120563443 NA coding downstream 454 5180196 ~ 5197117 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding downstream 181609 5361351 ~ 5371770 (+)
ndufaf5 ndufaf5 coding downstream 321290 5501032 ~ 5518108 (+)
LOC120564466 NA coding downstream 409927 5589669 ~ 5591008 (+)
LOC120564476 NA coding downstream 426712 5606454 ~ 5607801 (+)
G1612 NA non-coding upstream 86946 5067789 ~ 5071935 (+)
LOC120563689 NA non-coding upstream 133959 5024030 ~ 5024922 (+)
G1582 NA non-coding upstream 315590 4838096 ~ 4843291 (+)
G1578 LOC103374759 non-coding upstream 321460 4821739 ~ 4837421 (+)
LOC120563678 NA non-coding upstream 448002 4708204 ~ 4710879 (+)
G1761 NA non-coding downstream 45051 5224793 ~ 5225428 (+)
G1771 NA non-coding downstream 103205 5282947 ~ 5285344 (+)
G1759 NA non-coding downstream 105074 5284816 ~ 5296665 (+)
G1780 NA non-coding downstream 139040 5318782 ~ 5319304 (+)
G1782 NA non-coding downstream 144494 5324236 ~ 5324489 (+)
G1600 NA other upstream 120167 4977783 ~ 5038714 (+)
G1487 LOC103369331 other upstream 698477 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 722795 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 1344311 3792746 ~ 3814570 (+)
G1191 NA other upstream 1659777 3496606 ~ 3499104 (+)
G1756 NA other downstream 38326 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 55604 5235346 ~ 5327917 (+)
G1775 NA other downstream 192875 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 207651 5387393 ~ 5471409 (+)
snrpb2 snrpb2 other downstream 696805 5876547 ~ 5916374 (+)

Expression


Co-expression Network