LOC120563910


Basic Information

Item Value
gene id LOC120563910
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5790297 ~ 5803234 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808416.1
TTGTTGCCATGACACCGTGttttgtttacatgtagccgAGGGCTGGATGCGTAGCTCGGCTAGCTAACAGCTTTAACTTCTGTTTGTTACGTTAACTACGTTACTACCGTCATTTGCGAGCCTGCCAGCCTATTTCACGATGCCACCCAAGGCTAAAAGCAAAAAGTCAGCGAAGGTGAAGTCGTCTACCGTGGTGGACGGCCTGTCGACGGATGAGATGTCCAAGGATCAGCTGGAGGAGCACATCATCCGGCTCCGAGAGGAGCTGGACCGAGAGCGGGAGGAGAGGAGCTACTTCCAGCTGGAGAGGGACAAGATCCAGGCATTCTGGGAAATCTCCAAGAGGAGCCTGGAGGAGACGCAGGCCGAGCTGAGGAACGGACATCGGGAGAGAGACGAGGCCGAGGAGCGCCACCGGGTGGAGATCACTGTGTACAAGCAGAAGCTGAAGCACGTCCTGTCCGAACACCACGACAACATCTCGGAGCTGAAGATGGACGCCGTGGCGTCCACCTCGCTGATCCAGAACCAGCACACGGTGTCGGAGCTCGGCCTGCGCACAGAAGTGCACGGCCTGCAGGCCGACTTCAGACACAACCAGGCCCACAACCAGAACTGCATCAAGGACCTCAAGCTGAAACACCAGGTGGAGTTAATGGAGCTGGCCAACGACTACGACCGAAGAATCAGAGAAATTGAGGTGAAGTATCGCAAGAAGATGCAGTCGATGATCGACGCGGAGGGCAAGAGGCGGCGTGCCGAGGTCAACGAGATCGAGGACCGGATGAAAGGCCGCGTGGTGGCGCTGATGGAGGAGCACGACCGAGCGCTGCGTGGCGCCGAGGAGTACTACTCAGCTGTTCAGACCAAACTGCTGGCCGACCAGAAGCTGCTCAAGgaggAACTTGCGGAGGCGACCAAGCGCCAGGCGCGAGTGGACCGAGAGCTCTCAGCAGCCGAGCAGGAGAACAAGCGTCTGAGCGCGTCCCTGCAGGACGTCCAGCGGAAGCTGCCCGAGCTCCGCAAACAGCTGGACGACCACAACCGGGCCAAGGCCAAGATGGCGACGAGCCGAGCTCGAGTGAAGGTGGCCGAGAAGGAGCTGAGAGATCTGACGGTGGAGCacgagctgctgctgcaggctgcagagaAGGTCCAGCGGGAGCGGGACGAGCTGCTGAGGTTGCAGACCGAGGCCATCCTGGACGTGCAGCAGAAGAGCGGGCTGAaggagctgctgctggagagGAAGCTGGCGGCGCTGGCGGAGACCGTGGAGAAGAAGGAGGCGCAGCTCAGCGTCGCCCTGTCGGCCTCCAACCTCGACCAGACCGCCGGCGCCGGCGCCGCAAACAAACTCGAGGAAATATTGGCGTCTAAACGAGCGACCATCGACGCCTTGCAGAGCGACCTGGCTCGAGATTGTAAGGAGTACGACGGGCTGCTGCGGAGCTgccaggaggagctggaggccTCGGGGGGGCCGCTCACCCACTCCTCCTTCAGGCCCTCGGAGCACATCCTCCGGGGACGGACCTCTCTGGGACCGGCCTCCCAGCACTGAACACTGAACCCCTCCATGGgttacctacacacacacacacacacatatatatatatacatatacacacacatatacacacacacacacacacacatatata
>XM_039808423.1
TTGTTGCCATGACACCGTGttttgtttacatgtagccgAGGGCTGGATGCGTAGCTCGGCTAGCTAACAGCTTTAACTTCTGTTTGTTACGTTAACTACGTTACTACCGTCATTTGCGAGCCTGCCAGCCTATTTCACGATGCTGGAGGAGCACATCATCCGGCTCCGAGAGGAGCTGGACCGAGAGCGGGAGGAGAGGAGCTACTTCCAGCTGGAGAGGGACAAGATCCAGGCATTCTGGGAAATCTCCAAGAGGAGCCTGGAGGAGACGCAGGCCGAGCTGAGGAACGGACATCGGGAGAGAGACGAGGCCGAGGAGCGCCACCGGGTGGAGATCACTGTGTACAAGCAGAAGCTGAAGCACGTCCTGTCCGAACACCACGACAACATCTCGGAGCTGAAGATGGACGCCGTGGCGTCCACCTCGCTGATCCAGAACCAGCACACGGTGTCGGAGCTCGGCCTGCGCACAGAAGTGCACGGCCTGCAGGCCGACTTCAGACACAACCAGGCCCACAACCAGAACTGCATCAAGGACCTCAAGCTGAAACACCAGGTGGAGTTAATGGAGCTGGCCAACGACTACGACCGAAGAATCAGAGAAATTGAGGTGAAGTATCGCAAGAAGATGCAGTCGATGATCGACGCGGAGGGCAAGAGGCGGCGTGCCGAGGTCAACGAGATCGAGGACCGGATGAAAGGCCGCGTGGTGGCGCTGATGGAGGAGCACGACCGAGCGCTGCGTGGCGCCGAGGAGTACTACTCAGCTGTTCAGACCAAACTGCTGGCCGACCAGAAGCTGCTCAAGgaggAACTTGCGGAGGCGACCAAGCGCCAGGCGCGAGTGGACCGAGAGCTCTCAGCAGCCGAGCAGGAGAACAAGCGTCTGAGCGCGTCCCTGCAGGACGTCCAGCGGAAGCTGCCCGAGCTCCGCAAACAGCTGGACGACCACAACCGGGCCAAGGCCAAGATGGCGACGAGCCGAGCTCGAGTGAAGGTGGCCGAGAAGGAGCTGAGAGATCTGACGGTGGAGCacgagctgctgctgcaggctgcagagaAGGTCCAGCGGGAGCGGGACGAGCTGCTGAGGTTGCAGACCGAGGCCATCCTGGACGTGCAGCAGAAGAGCGGGCTGAaggagctgctgctggagagGAAGCTGGCGGCGCTGGCGGAGACCGTGGAGAAGAAGGAGGCGCAGCTCAGCGTCGCCCTGTCGGCCTCCAACCTCGACCAGACCGCCGGCGCCGGCGCCGCAAACAAACTCGAGGAAATATTGGCGTCTAAACGAGCGACCATCGACGCCTTGCAGAGCGACCTGGCTCGAGATTGTAAGGAGTACGACGGGCTGCTGCGGAGCTgccaggaggagctggaggccTCGGGGGGGCCGCTCACCCACTCCTCCTTCAGGCCCTCGGAGCACATCCTCCGGGGACGGACCTCTCTGGGACCGGCCTCCCAGCACTGAACACTGAACCCCTCCATGGgttacctacacacacacacacacacatatatatatatacatatacacacacatatacacacacacacacacacacatatata

Function

GO: NA

KEGG:

id description
K19942 GAS8; growth arrest-specific protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808416.1 True 1665 mRNA 0.60 11 5790297 5803234
XM_039808423.1 False 1575 mRNA 0.60 10 5790297 5803234

Neighbor

gene id symbol gene type direction distance location
LOC120564476 NA coding upstream 182496 5606454 ~ 5607801 (+)
LOC120564466 NA coding upstream 199289 5589669 ~ 5591008 (+)
ndufaf5 ndufaf5 coding upstream 272189 5501032 ~ 5518108 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding upstream 418527 5361351 ~ 5371770 (+)
LOC120563443 NA coding upstream 593180 5180196 ~ 5197117 (+)
prokr1a LOC103383410,LOC101078632 coding downstream 235977 6039211 ~ 6058589 (+)
LOC120563871 NA coding downstream 285618 6088852 ~ 6093727 (+)
LOC120563868 NA coding downstream 301911 6105145 ~ 6109440 (+)
LOC120563973 NA coding downstream 317160 6120394 ~ 6127443 (+)
LOC120563935 NA coding downstream 329401 6132635 ~ 6146027 (+)
G1787 NA non-coding upstream 10417 5401531 ~ 5779880 (+)
G1817 NA non-coding upstream 97824 5689969 ~ 5692473 (+)
G1813 NA non-coding upstream 139137 5637700 ~ 5651160 (+)
G1792 NA non-coding upstream 302548 5483542 ~ 5487749 (+)
G1791 NA non-coding upstream 314632 5474433 ~ 5475665 (+)
G1871 NA non-coding downstream 77119 5880353 ~ 5958646 (+)
G1820 NA non-coding downstream 84068 5887302 ~ 5958266 (+)
G1873 NA non-coding downstream 94471 5897705 ~ 5960101 (+)
LOC120564002 NA non-coding downstream 116321 5919555 ~ 5921025 (+)
G1886 LOC104947167 non-coding downstream 138215 5941449 ~ 5955263 (+)
acaa1 acaa1,LOC102793903 other upstream 318888 5387393 ~ 5471409 (+)
G1775 NA other upstream 415390 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 462380 5235346 ~ 5327917 (+)
G1756 NA other upstream 567553 5218068 ~ 5222744 (+)
G1600 NA other upstream 751583 4977783 ~ 5038714 (+)
snrpb2 snrpb2 other downstream 73313 5876547 ~ 5916374 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 582367 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 604166 6407400 ~ 6437217 (+)
G1973 NA other downstream 729207 6532441 ~ 6534370 (+)
G2530 NA other downstream 1896031 7699265 ~ 7699540 (+)

Expression


Co-expression Network