zgc:110222 (LOC103372080,LOC100694267)


Basic Information

Item Value
gene id zgc:110222
gene name LOC103372080,LOC100694267
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2689977 ~ 2693643 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812477.1
AGCTGCAGACATTTTAGCCGCAGAAGAAGAACCTCCACCCGACGCGGAAGCTAAAGCAGAGACGGGCCGGCTAAAGCTAAAGCTCGGCTAAATCAGCTGAAGGAGCAGTGGAGTCTGGAGCGAGTTACATGGCGGTGCAGGTGTGGTGCCTGTCGTTCCGGCAGCCGTACGCCGGTCTGGTTCTGGACGGCGTGAAGACGGTGGAGAGCCGCTGGCGGCCGCTGCTCGCCGCGCTGGAGAGCCAGACGCTGGCGGTGCACATCGCCCGGCGGGACTGGGACGGGGACGAGTGGCAGGCGGTGCTGAGCGGCCCGCTGGGGCTAACCCCCCCTCAGATACAAGCGCTCCTCCAGTCCGGGGAGAGGTTCGGCCGGGGCGTGGTGGCTGGATTGGTGGACGTGGGCGGGACCTGGCAGTGCCCCCCCTCCCTGCAGGGGGCGGAGCTTAAGGAGCTGGAGCGCTcggctgctctgattggtctgcagGAGAAACACCTGACCCGGCTGACCAACCCGCGCTGGCTGAAGGCGCCGCTGAGCGCCCGGGGGGGGCGCGACCTCTGGTCCGTGGAGATCCCCGCAGAACTGTTACCATGACGATGCACACGCCAAAGACTCTCAGGGCAGTTACCATGACGACGGACAGACGGACTCTGAGACGGACGTCTCTGGTCTGTTGCCGaggttttggggcttttttctacatttcttTTTCTATGAAGTCTGAAGTCAGAGATTCCCGTCCAGACCAAGTCCCCATGGTCCCAGACCTGTTCCTGTCCAGACCAAGCCCCCATGGTCTGGACAAGTCTCTGGTCTGCTGCCTTTATATTTTTTAGAcgttttttaaggttttttcaACGTTTCTGTCACTTTGTCTACGTTTCTTTTCTATAACGTTTAGAGTCGAGATCAGAGCAGAGACGAGTGTcttcttttgtctttcttttgcatttgtgtgaacatttttcattaaatttccggaaactttccatggaaagtttagctggggaattttggaaacttttatgggaattaatggaaatTTTGATGGGAGGTATTTCTTGGGCAGTCTTCACTCAGCTGCTGAATGATGGATTCTAGGAATCCAaataagtgggcgtggcctctATAGCCCAGCAGTAGGCTAGCCCAAACCATTGACCGTTAGCTTAGCATATGAAGGTAGCTAGCATGCTGCCTTTGATTtattatggttatggttatatgcgtgctaagctaaccatcagCGCTGTCTATTGTTTCCAGCCTATCAAGAACAagtgggctatacaattaacactcATAGGTTAAGTATTACCCCcccaaaattaaataaactacCGTATTTTAAGAACTAAATGACCAGtatgtagtaataataataataataataataatgcattttatttataggcGCCTTTCTAAACACTCAAGGTCACCTTACAAAATCAGCAATAAAACATTCAATCCATTAAAAAGCAATCAGAGAAACAGgcaataaaatataatactATTATCCCTTTATTATACAAAAAAAGGGTGGGGTCATTACAGTCAAagcaaaaatgaggaaaaaaaaaaaaagagaaaaaaaagaaaaagagagtaaGCCTGTCTGAAAAGATGAGTTTTTAGGTGAGATTAGAAAGTGGTTATGGACGTGGAGTGTTGAATGTAGTGGGACAGAGTAGCTTCTGCTGATGAATATAGGGAGGACGttcaactgaagttgcattaaatcaggttgttttaaccaagaTAATGCTGTAAGATCCCTGTTATAGACTAACACTATTATAACAAGCAACATTAcaaatatccagtttattcccgttaattcccatttattcccgttaattcccatggaaagtttccaactttgaaaattcccGGAATTTTGCAaccttttttgagtttttttaaaaaatatttttgtgtctTTATTGACGTTtgtagcatgttagcatgtaaagggttagggttggggggGTAGTAGAGTTCAGAGCAGAGACTCGTGTCGAGAAGCAAAACAAGCGTGAGAAACGTGTGAAGAAGTGGTGACCTTGAAAAGGTGGAGCTGTGTTCTCTGTAAAGACTTTAAATCTGTTTTGTTAATAAAGTTTCTTTAAACTCCA
>XM_039812486.1
CAGAAGAAGAACCTCCACCCGACGCGGAAGCTAAAGCAGAGACGGGCCGGCTAAAGCTAAAGCTCGGCTAAATCAGCTGAAGGAGCAGTGGAGTCTGGAGCGAGTTGTGAGTCCTGAAGACTTTCTGTCCGTCAGCGTGAATTCACTATCTTCACTTCTATCGATTAGGATGAAATCATAAAACATGGCGGTGCAGGTGTGGTGCCTGTCGTTCCGGCAGCCGTACGCCGGTCTGGTTCTGGACGGCGTGAAGACGGTGGAGAGCCGCTGGCGGCCGCTGCTCGCCGCGCTGGAGAGCCAGACGCTGGCGGTGCACATCGCCCGGCGGGACTGGGACGGGGACGAGTGGCAGGCGGTGCTGAGCGGCCCGCTGGGGCTAACCCCCCCTCAGATACAAGCGCTCCTCCAGTCCGGGGAGAGGTTCGGCCGGGGCGTGGTGGCTGGATTGGTGGACGTGGGCGGGACCTGGCAGTGCCCCCCCTCCCTGCAGGGGGCGGAGCTTAAGGAGCTGGAGCGCTcggctgctctgattggtctgcagGAGAAACACCTGACCCGGCTGACCAACCCGCGCTGGCTGAAGGCGCCGCTGAGCGCCCGGGGGGGGCGCGACCTCTGGTCCGTGGAGATCCCCGCAGAACTGTTACCATGACGATGCACACGCCAAAGACTCTCAGGGCAGTTACCATGACGACGGACAGACGGACTCTGAGACGGACGTCTCTGGTCTGTTGCCGaggttttggggcttttttctacatttcttTTTCTATGAAGTCTGAAGTCAGAGATTCCCGTCCAGACCAAGTCCCCATGGTCCCAGACCTGTTCCTGTCCAGACCAAGCCCCCATGGTCTGGACAAGTCTCTGGTCTGCTGCCTTTATATTTTTTAGAcgttttttaaggttttttcaACGTTTCTGTCACTTTGTCTACGTTTCTTTTCTATAACGTTTAGAGTCGAGATCAGAGCAGAGACGAGTGTcttcttttgtctttcttttgcatttgtgtgaacatttttcattaaatttccggaaactttccatggaaagtttagctggggaattttggaaacttttatgggaattaatggaaatTTTGATGGGAGGTATTTCTTGGGCAGTCTTCACTCAGCTGCTGAATGATGGATTCTAGGAATCCAaataagtgggcgtggcctctATAGCCCAGCAGTAGGCTAGCCCAAACCATTGACCGTTAGCTTAGCATATGAAGGTAGCTAGCATGCTGCCTTTGATTtattatggttatggttatatgcgtgctaagctaaccatcagCGCTGTCTATTGTTTCCAGCCTATCAAGAACAagtgggctatacaattaacactcATAGGTTAAGTATTACCCCcccaaaattaaataaactacCGTATTTTAAGAACTAAATGACCAGtatgtagtaataataataataataataataatgcattttatttataggcGCCTTTCTAAACACTCAAGGTCACCTTACAAAATCAGCAATAAAACATTCAATCCATTAAAAAGCAATCAGAGAAACAGgcaataaaatataatactATTATCCCTTTATTATACAAAAAAAGGGTGGGGTCATTACAGTCAAagcaaaaatgaggaaaaaaaaaaaaagagaaaaaaaagaaaaagagagtaaGCCTGTCTGAAAAGATGAGTTTTTAGGTGAGATTAGAAAGTGGTTATGGACGTGGAGTGTTGAATGTAGTGGGACAGAGTAGCTTCTGCTGATGAATATAGGGAGGACGttcaactgaagttgcattaaatcaggttgttttaaccaagaTAATGCTGTAAGATCCCTGTTATAGACTAACACTATTATAACAAGCAACATTAcaaatatccagtttattcccgttaattcccatttattcccgttaattcccatggaaagtttccaactttgaaaattcccGGAATTTTGCAaccttttttgagtttttttaaaaaatatttttgtgtctTTATTGACGTTtgtagcatgttagcatgtaaagggttagggttggggggGTAGTAGAGTTCAGAGCAGAGACTCGTGTCGAGAAGCAAAACAAGCGTGAGAAACGTGTGAAGAAGTGGTGACCTTGAAAAGGTGGAGCTGTGTTCTCTGTAAAGACTTTAAATCTGTTTTGTTAATAAAGTTTCTTTAAACTCCA

Function

NR:

description
PREDICTED: protein CXorf40A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812477.1 False 2137 mRNA 0.46 3 2689977 2693643
XM_039812486.1 True 2193 mRNA 0.46 3 2689977 2693623

Neighbor

gene id symbol gene type direction distance location
aars2 aars2 coding downstream 64023 2593535 ~ 2625954 (-)
LOC120561571 NA coding downstream 140128 2543893 ~ 2549849 (-)
LOC120566128 NA coding downstream 200346 2459892 ~ 2489631 (-)
LOC120566112 NA coding downstream 258529 2394635 ~ 2431448 (-)
LOC120566106 LOC105920176,LOC103375176,LOC108251144 coding downstream 344707 2303564 ~ 2345270 (-)
LOC120566206 NA coding upstream 22814 2716457 ~ 2733278 (-)
LOC120566216 NA coding upstream 44801 2738444 ~ 2797152 (-)
soul4 NA coding upstream 207503 2901146 ~ 2911531 (-)
gemin6 NA coding upstream 406026 3099669 ~ 3107278 (-)
LOC120550828 NA coding upstream 585783 3279426 ~ 3286257 (-)
G895 NA non-coding downstream 5376 2684193 ~ 2684601 (-)
G861 NA non-coding downstream 105735 2578112 ~ 2584242 (-)
G856 NA non-coding downstream 118791 2569990 ~ 2571186 (-)
G831 NA non-coding downstream 239202 2449866 ~ 2450775 (-)
G807 NA non-coding downstream 426817 2261027 ~ 2263160 (-)
G899 NA non-coding upstream 4421 2698064 ~ 2700311 (-)
G911 NA non-coding upstream 35729 2729372 ~ 2731075 (-)
G917 NA non-coding upstream 63147 2756790 ~ 2757043 (-)
G930 NA non-coding upstream 114581 2808224 ~ 2808554 (-)
G975 srf,LOC106584839,LOC103130129,LOC106961202,LOC106931781,LOC103471615 non-coding upstream 165973 2859616 ~ 2876259 (-)
G670 LOC103370005,LOC106529077 other downstream 639593 2049069 ~ 2050384 (-)
LOC120566421 NA other downstream 940285 1733546 ~ 1749692 (-)
stab2 NA other downstream 1113482 1470417 ~ 1576495 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 1329504 1359664 ~ 1360473 (-)
G519 NA other downstream 1715150 966236 ~ 974827 (-)
G974 NA other upstream 164853 2858496 ~ 2859302 (-)
G1003 tmem178a other upstream 270097 2963740 ~ 2964320 (-)
G1008 tmem178a,LOC102307988 other upstream 281595 2975238 ~ 2978115 (-)
LOC120550954 NA other upstream 538981 3232624 ~ 3241497 (-)
LOC120550734 LOC106675350 other upstream 575879 3269522 ~ 3274443 (-)

Expression


Co-expression Network