LOC120566206


Basic Information

Item Value
gene id LOC120566206
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 2716457 ~ 2733278 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812529.1
TGTCCGTCAGAGAGTTGCAGACTGTCGGAGCAGCAACATGTCCGCTGTCGCCGCTGCTGCAGGCCCTGCCCCCTGGAGGAACAACAGCCTGGtgatggggggggggcgggACCCTCCCCTGTCTGACCAGGGAGACACCATCATTGGAGTCTACCTGCTGCTGCTCGGGTGGCTGTCCTGGTTTGGAAACAGCATTGTCCTGTTCGTGTTGTGCCGGCAGAGAGCCACGCTGCAACCCACCGACTACCTGACCTTTAACCTGGCCGTCTCCGACGCCAGCATCTCCGTGTTCGGCTACTCCAGAGGCATCATCGAGATCTTCAACGTGTTCCAGGGCAGCGACTTCATCATCTCCTCCATATGGACCTGCGAGGTAGACGGGTTCTTTACACTGATATTTGGTCTGATCAGCATCCTCACGCTGACGGCGATCAGCATCACGCGCTACATCAAAGGCTGCCACCCcagcagagCCCATCACATCACCCGGACCAGTGTATGCGTGACTCTGCTGCTCATCTGGATCACAGCTGCATTCTGGGCCGGAGCGCCTCTGCTCGGCTGGGCCAGCTACAAAGATCGGGGGTACGGGACCTGTGAGATCGACTGGGCCAAAGCCAGCTACATGCCAGCCTACCGCGCCTACATCATCTCCATCTTCAGCAGCTGCTTCTTCCTGCCGGTGCTCATCATGCTCTTCTGCTACATCTCCATCATCAACACGGTGAAGAGAGGGAACGCCATGGCCGCCGGGGGGGAGCTCTCCGACCGCCAGAGGAAGATCGAGAGAGACGTCACCATCGTTTCCATCGTGATCTGCACGGCGTTCATCCTGGCATGGTCTCCGTACGCCGTGGTGTCCATCTGGTCCGCCTGGGGCTACCACGTGCCCAACCTCACCAGCATCTTCACGCGCCTCTTCGCCAAGTCCGCCAGCTTCTACAACCCGCTCATCTACTTCGGCCTCAGCTCCAAGTTCCGTAAAGACGTGGTCGTGCTGATGCCGTGCACGCCCGACGCCAAAGACACCGTGCGGCTGAAGCGCTTCAGACCCAAAGCCGACGCCAGACTCAAAGTCCCGCTGAACCGCACCGAGAAGAAGTATTCGCCCGGCAACAACCCGTACCCACTGCCGGAGAGCCCGCCCGCCACGCCCCCGCCAGCCAACACGGAAGTGTTCTACACGGCCACACCCCTCCCATCGGAGAGCAGCGTCGCCAACAAGGAAATGTTCTACACGGCCACACCCCTCCCACTGGAGAGCAGCGTCACCAACAAGGAAGTGTTCTACATCAACATGCCCCGCCTCTCGGAGAGCAGCGCCGACTTTGAGTGTGACAGACTCTGATGTCCCAACGCAGTCTCTGACCAACGCGTACGAGAGTTAACGGCCgaataaagatgtttttatatttaatactTGTATTTAGTTTGCAGAGTAGAGACCATTTTGCGTTGTTTGTTTCCCACGTAGAAGAATttctgcagaaagtaaatggtgggaaaaagaagaatataaatgtttttatgtcctttttatttatattcagCATATATTTAGACTAACAGATATCTTTATGAATTTTCCAGCTGATTACTGACTTTAAGACAATCATCTTTTCAAGTTTTCTGTATAAATTAAACATGCATATTAAACATTATCTTGTTAAGTAACAGAAATGTGAGTTTTGGATAAAGCCAGGTTTCATTGTGTTGACATGTTAGAGTCTCaacagtggtggtggtggccCAGTGGATAtcacacatgcctttggtgtgggagctctgggtttgattcccactgcgatacatcaaccaacgtgtccctgagcaaggcacttaacccctagttgctccagaggccaGCTTTTCCTGGCATCCCTCagagaaaaactaaatattttcaaccaatcagattgaGGCTAAGTTTGACCAAGGTCAACACTGAATGGTCAATTCATCGTAAGGAAAAAAACCAGAGAAGCCCTGGCTTCTCACCAATCACATGCCTCAAACAGATGAGTAACTATGGTAACAGGCCGGTGTCAGCTAACAGTCAGTTAGCAGCAAGTTTACAAAATGGATGGCAATCTTGAGTTTCTTGATAAAAATTACTTCACTTAACTTGCTTTTGAGCTACAACTGAAAGTTAAAGAGAGCGGTAGCCCTACACCGAAGCTGGATCTAACTCAGGGGAGAGCAAAGGGAAAGCGTCCATCTTTTTGTGATGGGAACTATGCCAAAACTGAATGGCTAACAGGAAGGCTTTTCTGCTGGCCTTGCCTGTTGTTTGACCAGTCAAGCTGCAGCAGCTCTTTAAACAACCCATGGAGCCAAGCCAGATTTGCCGATCTGATCTGAGAGAGGCATTCAAAACCACAAAGTCACATAACATCTGAACTCAAACTCAAACTTTTTGGACGACTTAGGATAAATGAAGCCTTGGATCAAGCGGCTGTAATAAGTGTGTCAAGGAAGCCATAACTGCTGTGGTGATGCAGGCAAGCCAACTACGATGGAGGAAGCTGCATGAGTGGACAAAGAGGCGGTCTACAGGAACTCGTCAAGGTGAAATGTCCACATGCTCTGTTCATTCACTGCTATGCACACAAACTAAATTTAGTTTTGGCTCAGGGGACAAGCAACATTCAGGAATCAAAGCTCTTTTTTGCCTCTCTTGACTGCTTCCACAACTTCTTCAGCCGTTCATGTAAACGGATAGCACTACTCGCTGAGGTGGAGTACCTGGTGGGAGTACCACTTGGTGGAACTTTAAAAGCCGGGCCGTGCATGCTGTACATGAGGGCGTACATCATTGATGATTGCTTTTGACCGGATCATGACTGAGCCTGGatgggacaaggatgcacagAGCTCTGCCCTGAAACAGGAATTGAACAACTTTGATTTCATTTTCATGCTTGAGGTTTTTCAAACCATTTTTGGCCACATTGAACTACTGTTCCAGGTACTCCAGAGCAAAGCCTTGGACATCACAAAATGTGACGCCTGAGTCAACAGCACTCTTAATGCACTGAGAGCTACCCGAAACAAACATTCAACCGGCTGTATGACAACACGGTGGAGACTGTTGGAGCACCAAACCAGCGACGCAAATGCAGCCGTCGGGCCTGGGAGGGCTTCGAGCTAGGAGTCAGAGCAGATGGCAACCAAGAGGACACGGGCAACGCGGTTAACTACCGACGCCTCTTCTTCCAACTGCTTGATGGCATTGTGCAGCATATGACACAACAATTCCAAGACATGAAGAATCTGAGTTTTTTTCATGTCCTGGATAATGCCTTGTTCAAGACGTACTCCCAGCCTGCAGGATTCCCGAGCCGTGAGATCACTCAGCTGGTTGAGACCTACCCACTGTTTGATGAACAGAGACTGGGAAATGAACTGCAGGTCATCTATGCAGATGCCCTCTTTCACAAGCCACCAGCTGAGCTGCTGGATATGCTCGTAACAGATGAGCTGACCACTGCCTTATGTGAGGTATGCAAACTACTGAGGCTGCTGCTCATCATACCCGTTACAAGCACATCTGCAGAAAGGTATTTTTCCTGCTTGAAAAGGATTCAAACCTACCTCAGAAACAGCTGTGGACAAGAGAGACTGGGCCACTTGGCGAAGATATCAATGGAAGCCACTGTAACACAAAACCTGAAGTCCCATGGAGAGCTATGTGACAGAGTCACTGAGCGCATTGCCACAATGAAGGATAGGAGAATGTCTTTCCTCTACAAGTAGaggtgagttaaaaaaaaaaattggactCACACAGTGACTGTCTGTCCCA

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812529.1 True 3805 mRNA 0.50 6 2716457 2733278

Neighbor

gene id symbol gene type direction distance location
zgc:110222 LOC103372080,LOC100694267 coding downstream 22814 2689977 ~ 2693643 (-)
aars2 aars2 coding downstream 90503 2593535 ~ 2625954 (-)
LOC120561571 NA coding downstream 166608 2543893 ~ 2549849 (-)
LOC120566128 NA coding downstream 226826 2459892 ~ 2489631 (-)
LOC120566112 NA coding downstream 285009 2394635 ~ 2431448 (-)
LOC120566216 NA coding upstream 5166 2738444 ~ 2797152 (-)
soul4 NA coding upstream 167868 2901146 ~ 2911531 (-)
gemin6 NA coding upstream 366391 3099669 ~ 3107278 (-)
LOC120550828 NA coding upstream 546148 3279426 ~ 3286257 (-)
LOC120550893 NA coding upstream 618068 3351346 ~ 3382291 (-)
G899 NA non-coding downstream 16146 2698064 ~ 2700311 (-)
LOC120566195 NA non-coding downstream 21736 2628333 ~ 2694721 (-)
G895 NA non-coding downstream 31856 2684193 ~ 2684601 (-)
G861 NA non-coding downstream 132215 2578112 ~ 2584242 (-)
G856 NA non-coding downstream 145271 2569990 ~ 2571186 (-)
G917 NA non-coding upstream 23512 2756790 ~ 2757043 (-)
G930 NA non-coding upstream 74946 2808224 ~ 2808554 (-)
G975 srf,LOC106584839,LOC103130129,LOC106961202,LOC106931781,LOC103471615 non-coding upstream 126338 2859616 ~ 2876259 (-)
G977 NA non-coding upstream 138227 2871505 ~ 2871933 (-)
G979 NA non-coding upstream 140842 2874120 ~ 2875135 (-)
G670 LOC103370005,LOC106529077 other downstream 666073 2049069 ~ 2050384 (-)
LOC120566421 NA other downstream 966765 1733546 ~ 1749692 (-)
stab2 NA other downstream 1139962 1470417 ~ 1576495 (-)
G565 LOC105912973,LOC105893694,LOC105900140,LOC105893089 other downstream 1355984 1359664 ~ 1360473 (-)
G519 NA other downstream 1741630 966236 ~ 974827 (-)
G974 NA other upstream 125218 2858496 ~ 2859302 (-)
G1003 tmem178a other upstream 230462 2963740 ~ 2964320 (-)
G1008 tmem178a,LOC102307988 other upstream 241960 2975238 ~ 2978115 (-)
LOC120550954 NA other upstream 499346 3232624 ~ 3241497 (-)
LOC120550734 LOC106675350 other upstream 536244 3269522 ~ 3274443 (-)

Expression


Co-expression Network