traf5


Basic Information

Item Value
gene id traf5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 4521099 ~ 4538660 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815731.1
TATCAATTATGTATGCCGCTAACACGATTATGGGCCTCCTGCGGACTCATGGCAGCAGCAGACACAAAGCTGGGAGGGTCCGAGGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCGACGAGTCCAGTCTGCGGTCCGACGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCAAGGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCAAGGAGTCCAGTCTGCGGTCCTGGGAGTCTGAGCTGACCTCCGTCCAGCACTCGCTGAAGTTCGTGGCGCCGCTGAAGGAGGAGTTTGTCTGTCCGGTCTGCAGAGGAGTCGTGCTCAACCCGCAGCAGAACTCCTGCGGACACATCTACTGCTTCCTCTGCCTCCAAAAACTGCTGGAGAGTTCTTCAGCGTCCGGTCCAGTCTGTCCCGTGGACGGAGCCGTCATCACACCAGCTGAGGTTTTCCAAGACAACTGCTGCAAACGAGAAATCTCCAGTTTAGAAGTGTACTGCACCAActccccagaatgcacctcTGTCGTCACGTTACGCCACCTGCAGGACCACCGGAGCTGCTGTGAGTACGAGCGGCTGCCGTGCGGTAACCCCGGCTGCAGGGCCGTGCTGCAGCGGAGACAGCTGCAGGAACACCTGAGCGTTACCTGTCCTCACCGCGCCGAGCCCTGCCCGCACTGCCAGCAGCCGCAGAGACTCCGCCTCCTGCAGGATCATGTGCAGAGCTTCTGTCCCGAGGTGCAGGTGGACTGTCCAATCGGCTGCTCCCTGAAGGTCCCCAGACACAAGCTGGCTGAACACAGAGAGGCGTGTCCAGAGCTTCACGTCGACTGTTCTTATAAGAAGTTCGGCTGCTCCGTGAAGGACAGGAGACGCAACGTTAAGCTGCACGAAGACGCCGCTGTCGCTCATCACATGCTGCTGGTCCTGAGGAGCAACACACACCTGGAGCAACAGGTGGAGGTTCTCCAGGAGGAGGCGCTgctgaggcagcaggaagtgcaGACAGACAGTTTGCTGCTCGCTGCTCTGCAGAAGAAGATGCGCccgctgcagcagcagaacagcaGCCATGAACACCTGGTCTCTGCAGCTCAGaGGGCACTGTGCAGGCAGCAGGAGGTCCTATCCTCCGTCCAGCAGGTTTCTCGGGGACTCGGTGGTCTGGAGGATCTGGAGGAACTCAGGAAGTCTCTGGATGCTGCGATCCAGGAAGTGTCTGCAGCCGAGGCCCTCAGAGAACACCTGGGAACTTTGGGGGAGAAGCTGAAGCATCACTCGGGTCTCCTGGATCTCCACGCCGCCACGCTCGGTCACAACAAGCAGCGCCTGCAGGAGCTCGAGGCCACGTCGTACGACGGCAGACTGATCTGGAAGATCGAGGATTTCGCGAACAGGAGGGAAgctgaggtcaaaggtcagcctCCGTGCCTGAGCAGCGTGCCCTTCCAAACCGGACGCTGCGGCTACAAAATGGCCTCCAAGGTCTATCTGAACGGGGACGGCGAGGGAAGAGGGACACACCTGTCTCTGTATGTGGTCCTGATGCCGGGAGACTTTGACGCTCTGCTGCCGTGGCCTTTCAGACAGACCGTGTCTCTGTCCGTTCTTGATCAAAGCGGCGCCGCTAACCACCGGAGTCTCAGCTTTAGACCCGACCCGGCATCCAAAAGCTTCCAGCGCCCCGCTGCCGAGTCCGTCAGCAACGTGGCCGTTGGGTTTTCATGCTTCATTCCTCTCGACCAGCTCGCTGCGTACGTCGAAGACGACACGCTGTTCGTCAAAGTGAAGGTGGACATGGCAGGTTTAGAGCATCTGTAGGCTTCTGTCCTCTATGTCACTGGTTCTAAAATGGGGGtaggtgtccccctaggggtactttggaggactgcagggggtacgtgtccccctaggggtactttggaggactgcgaGGGATGCACTCCAGTAATGTTTGCAGAGAACCTCACCTCCTGAAGAAAGCTCAGCTGATCCCCCAGGTTCACCTCTCTCTGAATCTTCTGCAGGTGAAGGGACATCTAGGATCACAGCTAGCACAACAACCagtgaaacacagacacagagcctgCAGTAGGAAAG
>XM_039815739.1
CCTGCAGTCAgagcttcctcttcctctcccgcTGCCGTGTCACGCGCAGATAACCGATTCTAATCGGTGCTATCGACCTGCTGTGGCCGGCGGACCGCAGCGTGTGCACCTGTGCGCAGCTGTGTGCAGCTGTGTGCAGCTGTGTGCAGCTGTGTGCAGATGTGTGTGACTTTCAGGACTCCAGAAGTTTCTCCGACTGAAGGGCCTCCTGCGGACTCATGGCAGCAGCAGACACAAAGCTGGGAGGGTCCGAGGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCGACGAGTCCAGTCTGCGGTCCGACGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCAAGGAGTCCAGTCTGCGGTCTGAAGAGTCCAGTCTGCGGTCCAAGGAGTCCAGTCTGCGGTCCTGGGAGTCTGAGCTGACCTCCGTCCAGCACTCGCTGAAGTTCGTGGCGCCGCTGAAGGAGGAGTTTGTCTGTCCGGTCTGCAGAGGAGTCGTGCTCAACCCGCAGCAGAACTCCTGCGGACACATCTACTGCTTCCTCTGCCTCCAAAAACTGCTGGAGAGTTCTTCAGCGTCCGGTCCAGTCTGTCCCGTGGACGGAGCCGTCATCACACCAGCTGAGGTTTTCCAAGACAACTGCTGCAAACGAGAAATCTCCAGTTTAGAAGTGTACTGCACCAActccccagaatgcacctcTGTCGTCACGTTACGCCACCTGCAGGACCACCGGAGCTGCTGTGAGTACGAGCGGCTGCCGTGCGGTAACCCCGGCTGCAGGGCCGTGCTGCAGCGGAGACAGCTGCAGGAACACCTGAGCGTTACCTGTCCTCACCGCGCCGAGCCCTGCCCGCACTGCCAGCAGCCGCAGAGACTCCGCCTCCTGCAGGATCATGTGCAGAGCTTCTGTCCCGAGGTGCAGGTGGACTGTCCAATCGGCTGCTCCCTGAAGGTCCCCAGACACAAGCTGGCTGAACACAGAGAGGCGTGTCCAGAGCTTCACGTCGACTGTTCTTATAAGAAGTTCGGCTGCTCCGTGAAGGACAGGAGACGCAACGTTAAGCTGCACGAAGACGCCGCTGTCGCTCATCACATGCTGCTGGTCCTGAGGAGCAACACACACCTGGAGCAACAGGTGGAGGTTCTCCAGGAGGAGGCGCTgctgaggcagcaggaagtgcaGACAGACAGTTTGCTGCTCGCTGCTCTGCAGAAGAAGATGCGCccgctgcagcagcagaacagcaGCCATGAACACCTGGTCTCTGCAGCTCAGaGGGCACTGTGCAGGCAGCAGGAGGTCCTATCCTCCGTCCAGCAGGTTTCTCGGGGACTCGGTGGTCTGGAGGATCTGGAGGAACTCAGGAAGTCTCTGGATGCTGCGATCCAGGAAGTGTCTGCAGCCGAGGCCCTCAGAGAACACCTGGGAACTTTGGGGGAGAAGCTGAAGCATCACTCGGGTCTCCTGGATCTCCACGCCGCCACGCTCGGTCACAACAAGCAGCGCCTGCAGGAGCTCGAGGCCACGTCGTACGACGGCAGACTGATCTGGAAGATCGAGGATTTCGCGAACAGGAGGGAAgctgaggtcaaaggtcagcctCCGTGCCTGAGCAGCGTGCCCTTCCAAACCGGACGCTGCGGCTACAAAATGGCCTCCAAGGTCTATCTGAACGGGGACGGCGAGGGAAGAGGGACACACCTGTCTCTGTATGTGGTCCTGATGCCGGGAGACTTTGACGCTCTGCTGCCGTGGCCTTTCAGACAGACCGTGTCTCTGTCCGTTCTTGATCAAAGCGGCGCCGCTAACCACCGGAGTCTCAGCTTTAGACCCGACCCGGCATCCAAAAGCTTCCAGCGCCCCGCTGCCGAGTCCGTCAGCAACGTGGCCGTTGGGTTTTCATGCTTCATTCCTCTCGACCAGCTCGCTGCGTACGTCGAAGACGACACGCTGTTCGTCAAAGTGAAGGTGGACATGGCAGGTTTAGAGCATCTGTAGGCTTCTGTCCTCTATGTCACTGGTTCTAAAATGGGGGtaggtgtccccctaggggtactttggaggactgcagggggtacgtgtccccctaggggtactttggaggactgcgaGGGGTAGATGCACTCCAGTAATGTTTGCAGAGAACCTCACCTCCTGAAGAAAGCTCAGCTGATCCCCCAGGTTCACCTCTCTCTGAATCTTCTGCAGGTGAAGGGACATCTAGGATCACAGCTAGCACAACAACCagtgaaacacagacacagagcctgCAGTAGGAAAG

Function

NR:

description
PREDICTED: TNF receptor-associated factor 5-like

GO: NA

KEGG:

id description
K09849 TRAF5; TNF receptor-associated factor 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815731.1 False 2124 mRNA 0.59 13 4521979 4538660
XM_039815739.1 True 2298 mRNA 0.59 13 4521099 4538660

Neighbor

gene id symbol gene type direction distance location
rcor3 rcor3 coding upstream 4023 4499013 ~ 4517076 (+)
tpcn3 LOC103368820,LOC102314232 coding upstream 188199 4312607 ~ 4332900 (+)
LOC120568266 NA coding upstream 251628 4253119 ~ 4269471 (+)
pgap4 NA coding upstream 273167 4244258 ~ 4247932 (+)
psen2 psen2,LOC100710620 coding upstream 865457 3647024 ~ 3655642 (+)
zgc:172076 NA coding downstream 244693 4783353 ~ 4806707 (+)
LOC120563657 NA coding downstream 318026 4856686 ~ 4939470 (+)
LOC120563603 stxbp6 coding downstream 408998 4947658 ~ 4949112 (+)
LOC120563472 NA coding downstream 620221 5158881 ~ 5179742 (+)
LOC120563443 NA coding downstream 641536 5180196 ~ 5197117 (+)
G1493 NA non-coding upstream 613 4520172 ~ 4520486 (+)
G1489 NA non-coding upstream 50990 4469806 ~ 4470109 (+)
G1385 NA non-coding upstream 70523 4443784 ~ 4450576 (+)
G1383 NA non-coding upstream 96845 4420462 ~ 4424254 (+)
LOC120568418 LOC106675372 non-coding upstream 182334 4336702 ~ 4338765 (+)
LOC120563678 NA non-coding downstream 169544 4708204 ~ 4710879 (+)
G1562 NA non-coding downstream 170620 4709280 ~ 4709697 (+)
G1578 LOC103374759 non-coding downstream 283079 4821739 ~ 4837421 (+)
G1582 NA non-coding downstream 299436 4838096 ~ 4843291 (+)
LOC120563689 NA non-coding downstream 485370 5024030 ~ 5024922 (+)
G1487 LOC103369331 other upstream 60695 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 85013 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 706529 3792746 ~ 3814570 (+)
G1191 NA other upstream 1021995 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 1040969 3468124 ~ 3480130 (+)
G1600 NA other downstream 439123 4977783 ~ 5038714 (+)
G1756 NA other downstream 679408 5218068 ~ 5222744 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other downstream 696686 5235346 ~ 5327917 (+)
G1775 NA other downstream 833957 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 848733 5387393 ~ 5471409 (+)

Expression


Co-expression Network