LOC120569364


Basic Information

Item Value
gene id LOC120569364
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 3778708 ~ 3780003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640872.1
GTCACTTTGCTGCAGACCAGATATGACCAACTGAGCAGCAACTACAGCCAGATCCAGAGCAACGTTTCTGAGAAGCTGTGTCCTGACGGATGGAAGAGATCTGGATGCAGTTGTTACTTTAAATCTAATGAGATGAAGATTTGGCCTGAAAGCAGAGCTGACTGTCGGCAGAGAGGAGCAGATCTGGTCGTCATGAACAACGAAGAGGAACAGATGTAGTCACAAGATGGCTTCACTACAACAGAAATGCTGAACTGTGATCAGAGAAATGATTGTTGTCAACTTCTAGAAGTTTGTCACTGAGCTGAGTAAGGATGGAGAGTACTGGATTGGTCTACGGTATGACTGGATACAAGCAGAATGGAAATGGGAATGGGTCAACGGATCACCGCTGACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640872.1 True 399 lncRNA 0.46 3 3778708 3780003

Neighbor

gene id symbol gene type direction distance location
psen2 psen2,LOC100710620 coding upstream 123066 3647024 ~ 3655642 (+)
LOC120562172 NA coding upstream 210698 3564722 ~ 3568010 (+)
LOC120555395 NA coding upstream 288698 3488343 ~ 3490010 (+)
rrbp1b NA coding upstream 330215 3413425 ~ 3448493 (+)
LOC120550686 LOC106676715 coding upstream 405567 3364816 ~ 3373141 (+)
pgap4 NA coding downstream 464255 4244258 ~ 4247932 (+)
LOC120568266 NA coding downstream 473116 4253119 ~ 4269471 (+)
tpcn3 LOC103368820,LOC102314232 coding downstream 532604 4312607 ~ 4332900 (+)
rcor3 rcor3 coding downstream 719010 4499013 ~ 4517076 (+)
traf5 NA coding downstream 741096 4521099 ~ 4538660 (+)
G1233 NA non-coding upstream 33002 3745332 ~ 3745706 (+)
G1219 NA non-coding upstream 96779 3661852 ~ 3681929 (+)
G1222 NA non-coding upstream 109660 3665453 ~ 3669048 (+)
G1218 NA non-coding upstream 128570 3649551 ~ 3650138 (+)
G1207 NA non-coding upstream 198953 3561467 ~ 3579755 (+)
G1324 NA non-coding downstream 103298 3883301 ~ 4118166 (+)
G1333 NA non-coding downstream 156746 3936749 ~ 3937664 (+)
G1360 NA non-coding downstream 459240 4239243 ~ 4239738 (+)
G1361 NA non-coding downstream 468066 4248069 ~ 4251473 (+)
G1363 NA non-coding downstream 474340 4254343 ~ 4254686 (+)
G1191 NA other upstream 279604 3496606 ~ 3499104 (+)
LOC120555387 LOC106675676,LOC106675675 other upstream 298578 3468124 ~ 3480130 (+)
dzank1 NA other upstream 518950 3175601 ~ 3259758 (+)
LOC120557752 LOC104935435,LOC108250455,LOC106524354,LOC101471560,LOC103371946,LOC102291612 other upstream 621570 3128089 ~ 3157138 (+)
LOC120567079 NA other upstream 707235 3068398 ~ 3071473 (+)
LOC120562910 NA other downstream 12743 3792746 ~ 3814570 (+)
pex6 pex6,LOC104944420,LOC104961583 other downstream 628435 4408438 ~ 4436086 (+)
G1487 LOC103369331 other downstream 675204 4455207 ~ 4460404 (+)
G1600 NA other downstream 1197780 4977783 ~ 5038714 (+)
G1756 NA other downstream 1438065 5218068 ~ 5222744 (+)

Expression


Co-expression Network