G78836


Basic Information

Item Value
gene id G78836
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36534793 ~ 36642606 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105459
ctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacactcacacacacacacacacacacagagacacacacacacagagacacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacacacagaaacacacacacacacacacagacagataaaccgacacagagacacagacacagacacacacacacacacacacacacacacagagacacacacacacacagatacacacacacacacacacacacacacacacacagagacacacacacacacacacacacaca
>TU105460
GCAAAACCTCCACCTTGACCTGcagacagaggcacacacacacacacacacacacacacacagagacacacacacacacacacagacacacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacacagacacagacacacacacacacacacacacacacacagagacacacacacacacagataaacagacacagatagagacacacacacagatacacacacacacacacacacacacacagagagacacacacacacacacacagagacacacacacagagacacacac
>TU105463
ctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacactcacacacacacacacacacacagagacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacacacagaaacacacacacacacacacagacagataaaccgacacagagacacagacacagacacacacacacacacacacacacacacagagacacacacacacacagatacacacacacacacacacacacacacacacacagagacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105459 False 354 lncRNA 0.49 3 36534793 36590475
TU105460 True 361 lncRNA 0.50 3 36589831 36642606
TU105463 False 336 lncRNA 0.49 3 36534793 36590475

Neighbor

gene id symbol gene type direction distance location
LOC120563182 NA coding upstream 151697 36368694 ~ 36383096 (+)
nat16l NA coding upstream 167768 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 344378 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 405551 36111050 ~ 36129242 (+)
dek LOC102312342,LOC102210945 coding upstream 424661 36092199 ~ 36110132 (+)
atp2c1 LOC103369286 coding downstream 117904 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 166954 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 212813 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 252783 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 682295 37324901 ~ 37326438 (+)
G78813 NA non-coding upstream 26979 36446647 ~ 36507814 (+)
G78798 NA non-coding upstream 118909 36398049 ~ 36415884 (+)
G78770 NA non-coding upstream 195239 36335117 ~ 36339554 (+)
G78776 NA non-coding upstream 245639 36288792 ~ 36289154 (+)
LOC120563188 NA non-coding upstream 362629 36161780 ~ 36172164 (+)
G78862 NA non-coding downstream 15402 36658008 ~ 36658306 (+)
G78863 NA non-coding downstream 23991 36666597 ~ 36667363 (+)
G78825 NA non-coding downstream 42227 36684833 ~ 36720480 (+)
G78865 NA non-coding downstream 49592 36692198 ~ 36698972 (+)
G78866 NA non-coding downstream 51497 36694103 ~ 36698507 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 69563 36392252 ~ 36465230 (+)
G78772 NA other upstream 183798 36258160 ~ 36350995 (+)
G78759 NA other upstream 343954 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 646621 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 760805 35743295 ~ 35773988 (+)
LOC120562457 NA other downstream 43330 36685936 ~ 36703993 (+)
G78888 NA other downstream 196616 36839222 ~ 36939954 (+)
G78989 NA other downstream 788565 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 888084 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1236310 37878916 ~ 37888006 (+)

Expression


Co-expression Network