G78990


Basic Information

Item Value
gene id G78990
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37433346 ~ 37467880 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105689
AGCCCAACACACTTTCTGTGAAGTTTCCCCTTTATTATCTGTTCACcagagaggaaacactgcaactTCAACCTTTTAGAAAGCTGAAAACATGTTTACTGATTCATCATCCGAATAGATGCCCAGTGACAGTTATCGAAGAGGAAATCGTAATTGGAGCCACCAGTCGCCACAAAGTCACCCACGGTCTTCCTCCCCTGGAAATTCCCAGTTTTTACAACCTGcaaagataaaataaaaaaaaacagaacagcaCAAGAGTTTGACCCTCTGACACTATGTTCTGTAACAATAAGATAATAATAAAGATTTACCTTCCAGCTTGAACTCATGTAATCAGCTCTGGTCACCACCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105689 True 357 lncRNA 0.41 3 37433346 37467880

Neighbor

gene id symbol gene type direction distance location
tmem116 NA coding upstream 8526 37404963 ~ 37424820 (+)
LOC120561882 NA coding upstream 41354 37387117 ~ 37391992 (+)
LOC120562463 NA coding upstream 55562 37362224 ~ 37377784 (+)
LOC120561883 NA coding upstream 73721 37354983 ~ 37359625 (+)
LOC120561884 NA coding upstream 81775 37336071 ~ 37351571 (+)
LOC120561682 NA coding downstream 97876 37565756 ~ 37568029 (+)
LOC120562860 NA coding downstream 109599 37577479 ~ 37578431 (+)
LOC120562465 NA coding downstream 110717 37578597 ~ 37579855 (+)
LOC120561715 NA coding downstream 115243 37583123 ~ 37586138 (+)
LOC120562469 NA coding downstream 238225 37706105 ~ 37709961 (+)
G78961 NA non-coding upstream 54032 37295566 ~ 37379314 (+)
G78947 NA non-coding upstream 227098 37201191 ~ 37206248 (+)
G78925 NA non-coding upstream 343932 37041691 ~ 37089414 (+)
G78889 NA non-coding upstream 385313 37003583 ~ 37048033 (+)
G78998 NA non-coding downstream 24926 37492806 ~ 37494603 (+)
G78999 NA non-coding downstream 32010 37499890 ~ 37500110 (+)
G79004 NA non-coding downstream 57996 37525876 ~ 37530597 (+)
G79011 NA non-coding downstream 75025 37542905 ~ 37543545 (+)
LOC120562911 NA non-coding downstream 88795 37556675 ~ 37560786 (+)
G78989 NA other upstream 667 37431171 ~ 37432679 (+)
G78888 NA other upstream 493392 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 729353 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 763317 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 968116 36392252 ~ 36465230 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 62810 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 411036 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 588536 38056416 ~ 38145804 (+)
G79351 NA other downstream 702174 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 714270 38182150 ~ 38188763 (+)

Expression


Co-expression Network