LOC120561841


Basic Information

Item Value
gene id LOC120561841
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 1977271 ~ 1979210 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805130.1
ATGCTACTCTCGTGGATTGCAATAAAACAGAGCCTCAAGGATATCAGTTATCTGGCTGTGGATGTTTTTGTAACTGGTGAAAGGGATGGCTTCCGAAGAACTCTCACCCTCCTCCTCACCTGTAGCTTCTCCAGCCTCCTGCTCAGCTCCCTGCTCCTCCTCTACCTCATCTTCACCGTGAACTATGAGCTAGCGGTGGCGGGATTGGTCGCCGGCTTCTTTGGGACACTACTGACACTCGCCCTCTTTCTATCAAAGAGAGTAAGGTGCTTTGGGACTCTGTTTGTTATCTCCATTTTCATGAAGAAAAGTCGGAACCTGCTCCTGACCGCTGGGACTAGTTTGGTGGTTCTTAGAAATATCCGCAACACCTTGGAGAACATCACAGGCCTGGTCAGGAGTATGCTCTGCAACCTGAAGGCTAAGAAAGCTGCCATGCTCGCTCCGTTCAGTAACTATGTCAAGATGTTGAAGTGGATAGGAAACATTCTCAAGGGGCTGACAGACTTAGGGGTGGTGAACCTTGACTCCCAACTCAAAGTTACACCCAGACTGGAATCAGACGAACTCAGGGAGAAGCTCAGCGAAGCAGAGCAGAAGCTGAATGTAACAGTGAAGTGCGTGCAGTCCCTGATGAATACAGTCTCCTCTGTGAGCGATAAGGCGTTTCCTGCCATCAGCTTCCTCGTGCTCACGATGTTTATAGCGCTGCACATAAAGAACTACTGCAGCGACATGAAATACGAAAACAGGTTCGTGAGCAGCAGATTTGTTCACTTTGACGAGAAGCAGAAGACGGAAGGGAAGCCCCACGTCCTCCCCCTCACTCCAGAGGAAGAGAAGCTGTACACCACTGTCCCCTCGGCCCGTCCCACCACCAGAGAGGGGAGAGCTATGCTGAAATTTGGTGTTCCAGTCGTCTCCCATTTTATGGCTTGGGTCATATTTATAACCGTGGATGCCTTGTTGTATTGCTTTGTCGATATTGTAACAACAAAGTTATCAGAGCTGGAACCATTCCATGTCCCGTTGTTAATAAGCATCAAAGGGATTGCTACTTTAATAGGTATACCACTCGGTGAGGAAAACCACCAAAAAGATTTTTCCTACTCTGTGAGCCTCTTTGAGAAGAAGTGTCTTCCTAAACCCAAGCTGCTGCTCTATACCTCTGTGGTTCCTTTGGCTGCCATCCTGCTCACCCTGCTCATTATGGCTCTGATGGCTGCCAAAGTGGCCCAGCTCAGGCTCATGGTCTGTGAGCAGTTCTTCTCCACCGCTGCGGAGGAGAGAGTGGAGTACCTGCACGCCAAAATCCTGAGGAAGAgagtaaaaaagaagaagggaaAAAACAACTGCAGCCTCACGTCGCTCTATCTTAAGCCACATTTCTGGTGTCCGCTGCTCTTCAGGCCCAAAGAGAATCCACAACATATCGTGTGAGGATGTTATTTTCTCTGCCCTGCTCCATGGTTTGATTTATTCTATGAATAAGAAGTCATATAAAACATTAGGTCTACTGATGCGGACAACTTTGATCAAAGGATTCTAtgtctaaatttttttttacctctggcTTTTTTACCTCATCCTCCTTGCACAAAGTTGGTGTCTGTCCAAGAATCACGGCCAGCTCTCAAAGTGTCTCTCTGgagaaaaataatgacaaataaTAATGACAATAACTGCTGCAACTGCAACATCATGCGGCACTGTCAGTAGATctatttacttttttaatgTTGATTATAATATTCCGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805130.1 True 1760 mRNA 0.47 3 1977271 1979210

Neighbor

gene id symbol gene type direction distance location
oxr1a oxr1 coding downstream 326632 1376272 ~ 1650639 (-)
si:dkey-29h14.10 NA coding downstream 662135 1308856 ~ 1315136 (-)
LOC120561787 azin1 coding downstream 804726 1160199 ~ 1172545 (-)
ubr5 ubr5 coding downstream 832356 1088737 ~ 1144915 (-)
LOC120562566 mtdh,LOC103364934,LOC102233891 coding downstream 900557 1062558 ~ 1076714 (-)
rims2a rims2,LOC106523613 coding upstream 3194 1982404 ~ 2171236 (-)
dcaf13 dcaf13 coding upstream 194894 2174104 ~ 2192793 (-)
LOC120562915 cthrc1 coding upstream 222328 2201538 ~ 2207789 (-)
LOC120562568 fzd6 coding upstream 230646 2209856 ~ 2226422 (-)
mms22l mms22l coding upstream 315331 2294541 ~ 2319405 (-)
G69932 NA non-coding downstream 12964 1956191 ~ 1964307 (-)
G69927 NA non-coding downstream 30114 1946945 ~ 1947157 (-)
G69893 NA non-coding downstream 300920 1676118 ~ 1676351 (-)
G69866 NA non-coding downstream 622246 1354298 ~ 1355025 (-)
G69817 NA non-coding downstream 691392 1285584 ~ 1285879 (-)
G69995 NA non-coding upstream 149261 2128471 ~ 2128741 (-)
G70090 NA non-coding upstream 629032 2608242 ~ 2608898 (-)
G70081 NA non-coding upstream 631142 2610352 ~ 2611804 (-)
G70092 NA non-coding upstream 658852 2638062 ~ 2638288 (-)
G70094 NA non-coding upstream 664663 2643873 ~ 2644416 (-)
zfpm2a zfpm2 other downstream 116105 1725158 ~ 1861166 (-)
osr2 osr2 other downstream 1244515 728485 ~ 732756 (-)
usp45 usp45 other upstream 747958 2727168 ~ 2818027 (-)
G70407 NA other upstream 1649923 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 2000101 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 2093114 4072324 ~ 4077811 (-)
cep76 cep76 other upstream 2382785 4361995 ~ 4445053 (-)

Expression


Co-expression Network