aldh5a1 (aldh5a1)


Basic Information

Item Value
gene id aldh5a1
gene name aldh5a1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36855419 ~ 36869334 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805847.1
GTCTCATATTTTTGACTATAGGCTAAATAAGCCAAACTGTCTactattttcaaaaaatatttcatCTCGTGTATTGTTTTCGTGTCCCCGtagaaatgtgtttctttatgttGAACATTGGACGCATTTGAGCAGAAGAGGACCGTAAAGTGCTCTGATGTTGGCCAATTTGCGTATCTAGGATGGCGAAGGAATGTCCCGCCCTTATccacctctgattggctggtaccCGCTTCCTTTGTTTGttggattggttaggtttaggcatgaggaAGGAgattggttaaggttaaggtgaGAGTACCAgagtaagccaatcagaggcagggTAGGGCGGGACATGGCTTCGTCCTCCTAGGAAATATAAATTCGCCTCCGGTTGTGTTGAGTTCGGACTGGTTTAAACCGACAGAAAGCTGCCGGAGCTTCTCCTTCCGACCTGCGGGGAGAAACACGACCTTCACCCCGCACACAGTGAGAGTTTACACACACCCAGCTGCAGATATTCACTCCCAATATGTCCACTTTCTGTGTCCTGAGGACTCGATGCTTCCTCCGGCAGGTATTCCCCGGCCTGCCCGCCGCCATGCAGAGACACTACAGCCTGGATGTGTCCGCTCCGCTGCTGCGGACGCAGGGCTACGTAGACGGGCGCTGGGTCTCCGCAGCCTCGGTGTTCCCTGTGCTGGACCCGGCCACCGGGGAGGAGATAGCCCGGGTGTCAGACTGTGGCCCCGCTGAGGCCAAGCAGGCTGTGGACGCTGCGTACAAGGCGTTTCATTCCTGGAAGCAGTACAGTGCTAAGGAGCGGAGCGTCCTGTTGAGGAAATGGTTCGACCTGCTGATGCTGCACAAACAAGACCTGGCCAAACTGATCACGTTCGAATCTGGAAAGCCCCTGCAGGAGTCTCTCGGGGAGATTGGGTACTCCGCCTCCTTCCTGGAGTGGTTTTCGGAGGAGGCGCGCCGAGTGTACGGCGACGTCGTCCCGTCGCCCGCCAAAGACCGAAAGATCCTCCTCCTCAAGCAGCCCGTGGGCGTCTCCTCCATCATCACACCGTGGAACTTCCCCAGCGCGATGATCACCAGGAAGGCCGGCGCGGCTCTGGCTGCCGGCTGCACGGTGGTGGTGAAACCGGCGGAGGAcacgccgctgtcggcgctcgccCTGGCCGAGCTGGCGGAGCAGGCGGGCATCCCCGCTGGCGTGTTCAACGTAGTGCCGTGCTCCCGAGAGAGGACTCCGTCGGTCGGGGAGGTTCTCTGCACTGACCCACTGGTGGCCAAAATCTCCTTCACTGGCTCCACCGCCACCGGCAAGGTGCTGCTGAAACTGGCTGCTGACACTGTGAAGAAGGCGTCCATGGAGCTGggaggccacgcccccttcatCGTGTTCGACAGCGCCGACGTCGACAGGGCGGTGGCCGGCGCCATGGCGTCCAAGTTCAGGAACTCTGGACAGACGTGCGTGTGTTCCAACCGGTTCCTGGTGCAGAGCGGCATTCACGACCACTTCCTGGAGAAGCTGGGCCGAGCGATGGACGCTGAGCTGCGCCTGGGTCACGGCGCGGAGCCCGGCACCACCCAGGGGCCCCTCATCAACACCCGAGCTGCAGAGAAGGTGGTCCAGCAGGTATCGGACGCGGTGTCGAGGGGGGCGAAGGTGCTGCGGGGCGGGAAGCGTCTGGACGGCTCCTTCATGGAGCCCACTCTGCTGGCCGGCGTCACCACGGACATGATCTGCACCCAGGAGGAAACCTTCGGCCCGCTGCTGCCCGTCATCAGGTTTAACACGGAGGAAGAGGCTCTGGCGATCGCCAACGCATCTAACGTCGGGCTGGCAGGTTACTTCTACTCGCAGGATGTGAGTCAGATCTGGCGGGTGGCGGAGGCGTTGGAGGTGGGGATGGTCGGAGTCAACGAGGGCCTGCTGTCCACCCCTGAGGCCTCGTTCGGGGGGGTCAAACAGTCCGGTTTGGGCCGCGAAGGCTCAAAGTACGGCATCGAAGAGTACCTGGAGGTCAAGTACATGTGCTTCGGAGGCCTGAAACCCTGAAACCTAACGGAGCAGCGCCACAGGTCCAGACTGTGGTACTACACTCATTTAACTGCAGTAATCATTAAAGGTCCTAGCTGTAGATCTCAGGTTTGAAttgatttaattttcaaaaagtttctatatcagaaatgtgggtttctttccaccaaattttcaaaagaaagtaacgtggatggttccctacaacgctcttcacaagtaaaataactgATCAGTTcaatactttcattgaatttgggtgttttattcaatgttattaattaatgtcagaaaaagcttcttaaatgtgggggaaaaaacacaaaagtgacaaaaaaacatcgGAAGTAGTGACAAATGAACTcagataaaagtgacaaaagtgtcgaaaaagacgaccaaaacgttttaattttaaattttgaccgaGAAAATTCTgatgttttcctaaacctaaaaCAAGCAACACAAAGGTCCGCTTAATGCTTTATTGTTCACATTTACaaacatttctttattattttttacaagaGAAAAGATTTTTAACATGATGACTAACTCATGAGTCACACGCAGTTATAAACTTCCCCAAATCCAATAAAGACCAGGACACAcgatgctaatgttagcatgaaCTCTGAGAAAAGCATCATTCATGTTTCAGTCCCGAATGCCGCTTCTTCATGCCACAAAATAATGCAGTTTGCTAATAAATATCCCTTcgggaaaacagaaaaaagaagcTGCACACTTGATTATGGAAGAAAAGGGAGATTAACTGTgatgaaatgaataaatgcacAAAACCGTTTTGCTAGATTTTTGTAAAATCATTGTATTGAACATCCCGATGTTGACGTCCTGTAGAAGCCTGTTCATGTaaaaatctgtatttttttatgattaaaatACTTCTATATGCTTTCAAAGTGGGTCTAAAAATAATTCCAAGCATCAGAATTCGGCCATTTATACAAAAATGTGTCAGCGTATTTGTCTTGTGTTTGGAACATTAGCAAGTTTCTGAAGTCCTTGAACACATTTCAATAATATctgtaaagcccagttcagaccaaagattgtTGAAACTTGCAGCTACTTGCAACGCTCTGGTCTGCAGAGTTCTGAAAGCTGCAACTTTAATAAGAcaagacggtgtatcatctgcATAGCAACAACTCTGTACTTCTGTTCTAACTTCAGACTTTCAGGCTTTTgggtagctggatatatcatttgtagcgtcttaaaatatgaatgaggagagtgatagtgagatgctcGCTACAACTGCATTTCTAGTAGAGATGAAACggagaaaacattttatttgtctGATTCTCTGCTTTGTTCTATCGCCGTAgccgctccctctcttcagtctctctctagtctctcaatgccagaccttcctctacagcgctgtggaggagggtctggctagtccacacagcattcctggatgggagaaaaacgtgctctggtttattggcatttctttaaaccaatcacaatcgtcgaggcgaaatagcctcgggaaggaacttgttttggtggaacgtgtacgttcaaaagtagtttgtCGTGCAAAACTAGTCCGAGACTGGCCTGAAACTTTTCCTGCAACGATccaaaattatttaatttcacTGAGAATCtatggtctgaactgggctttaaacCTCTGTGTTGCATAAACATGttcataaatacataaatgaataTAAAATGTTGAACAAGCGGCGTGATGTTAATGTTAGGACGCCAGCTTTTAACATGTATGCATGCacttattatttttgtattttttttaaacatatttcttTACGGAGATAAATACCATGAGAAGATGTAAGTAATTATTGTGGTACGGTAGTTTAATAAATACCTTGTTACTGTTTAGATTGATGTTGTTGGGCAGGTTTTGTTTTAAACTTCTGACAGATAACCACAGGAAGTAAAATCATGGTCGCCAATGTTATAAGTGCCATAAAACAGACTTTTATTTCTAATGTGAAGTGAAAATTGTCTTAACTGTGATATAATGTTGTCGTCATAGTTAATGTAAAAAGAGgggatacatttttgtatttctgaCTATAGATATTAATGGAAAATTAAAGAGGAAATTGTAATACTA
>XM_039805848.1
tggttaaggttaaggtgaGAGTACCAgagtaagccaatcagaggcagggTAGGGCGGGACATGGCTTCGTCCTCCTAGGAAATATAAATTCGCCTCCGGTTGTGTTGAGTTCGGACTGGTTTAAACCGACAGAAAGCTGCCGGAGCTTCTCCTTCCGACCTGCGGGGAGAAACACGACCTTCACCCCGCACACAGTATTCCCCGGCCTGCCCGCCGCCATGCAGAGACACTACAGCCTGGATGTGTCCGCTCCGCTGCTGCGGACGCAGGGCTACGTAGACGGGCGCTGGGTCTCCGCAGCCTCGGTGTTCCCTGTGCTGGACCCGGCCACCGGGGAGGAGATAGCCCGGGTGTCAGACTGTGGCCCCGCTGAGGCCAAGCAGGCTGTGGACGCTGCGTACAAGGCGTTTCATTCCTGGAAGCAGTACAGTGCTAAGGAGCGGAGCGTCCTGTTGAGGAAATGGTTCGACCTGCTGATGCTGCACAAACAAGACCTGGCCAAACTGATCACGTTCGAATCTGGAAAGCCCCTGCAGGAGTCTCTCGGGGAGATTGGGTACTCCGCCTCCTTCCTGGAGTGGTTTTCGGAGGAGGCGCGCCGAGTGTACGGCGACGTCGTCCCGTCGCCCGCCAAAGACCGAAAGATCCTCCTCCTCAAGCAGCCCGTGGGCGTCTCCTCCATCATCACACCGTGGAACTTCCCCAGCGCGATGATCACCAGGAAGGCCGGCGCGGCTCTGGCTGCCGGCTGCACGGTGGTGGTGAAACCGGCGGAGGAcacgccgctgtcggcgctcgccCTGGCCGAGCTGGCGGAGCAGGCGGGCATCCCCGCTGGCGTGTTCAACGTAGTGCCGTGCTCCCGAGAGAGGACTCCGTCGGTCGGGGAGGTTCTCTGCACTGACCCACTGGTGGCCAAAATCTCCTTCACTGGCTCCACCGCCACCGGCAAGGTGCTGCTGAAACTGGCTGCTGACACTGTGAAGAAGGCGTCCATGGAGCTGggaggccacgcccccttcatCGTGTTCGACAGCGCCGACGTCGACAGGGCGGTGGCCGGCGCCATGGCGTCCAAGTTCAGGAACTCTGGACAGACGTGCGTGTGTTCCAACCGGTTCCTGGTGCAGAGCGGCATTCACGACCACTTCCTGGAGAAGCTGGGCCGAGCGATGGACGCTGAGCTGCGCCTGGGTCACGGCGCGGAGCCCGGCACCACCCAGGGGCCCCTCATCAACACCCGAGCTGCAGAGAAGGTGGTCCAGCAGGTATCGGACGCGGTGTCGAGGGGGGCGAAGGTGCTGCGGGGCGGGAAGCGTCTGGACGGCTCCTTCATGGAGCCCACTCTGCTGGCCGGCGTCACCACGGACATGATCTGCACCCAGGAGGAAACCTTCGGCCCGCTGCTGCCCGTCATCAGGTTTAACACGGAGGAAGAGGCTCTGGCGATCGCCAACGCATCTAACGTCGGGCTGGCAGGTTACTTCTACTCGCAGGATGTGAGTCAGATCTGGCGGGTGGCGGAGGCGTTGGAGGTGGGGATGGTCGGAGTCAACGAGGGCCTGCTGTCCACCCCTGAGGCCTCGTTCGGGGGGGTCAAACAGTCCGGTTTGGGCCGCGAAGGCTCAAAGTACGGCATCGAAGAGTACCTGGAGGTCAAGTACATGTGCTTCGGAGGCCTGAAACCCTGAAACCTAACGGAGCAGCGCCACAGGTCCAGACTGTGGTACTACACTCATTTAACTGCAGTAATCATTAAAGGTCCTAGCTGTAGATCTCAGGTTTGAAttgatttaattttcaaaaagtttctatatcagaaatgtgggtttctttccaccaaattttcaaaagaaagtaacgtggatggttccctacaacgctcttcacaagtaaaataactgATCAGTTcaatactttcattgaatttgggtgttttattcaatgttattaattaatgtcagaaaaagcttcttaaatgtgggggaaaaaacacaaaagtgacaaaaaaacatcgGAAGTAGTGACAAATGAACTcagataaaagtgacaaaagtgtcgaaaaagacgaccaaaacgttttaattttaaattttgaccgaGAAAATTCTgatgttttcctaaacctaaaaCAAGCAACACAAAGGTCCGCTTAATGCTTTATTGTTCACATTTACaaacatttctttattattttttacaagaGAAAAGATTTTTAACATGATGACTAACTCATGAGTCACACGCAGTTATAAACTTCCCCAAATCCAATAAAGACCAGGACACAcgatgctaatgttagcatgaaCTCTGAGAAAAGCATCATTCATGTTTCAGTCCCGAATGCCGCTTCTTCATGCCACAAAATAATGCAGTTTGCTAATAAATATCCCTTcgggaaaacagaaaaaagaagcTGCACACTTGATTATGGAAGAAAAGGGAGATTAACTGTgatgaaatgaataaatgcacAAAACCGTTTTGCTAGATTTTTGTAAAATCATTGTATTGAACATCCCGATGTTGACGTCCTGTAGAAGCCTGTTCATGTaaaaatctgtatttttttatgattaaaatACTTCTATATGCTTTCAAAGTGGGTCTAAAAATAATTCCAAGCATCAGAATTCGGCCATTTATACAAAAATGTGTCAGCGTATTTGTCTTGTGTTTGGAACATTAGCAAGTTTCTGAAGTCCTTGAACACATTTCAATAATATctgtaaagcccagttcagaccaaagattgtTGAAACTTGCAGCTACTTGCAACGCTCTGGTCTGCAGAGTTCTGAAAGCTGCAACTTTAATAAGAcaagacggtgtatcatctgcATAGCAACAACTCTGTACTTCTGTTCTAACTTCAGACTTTCAGGCTTTTgggtagctggatatatcatttgtagcgtcttaaaatatgaatgaggagagtgatagtgagatgctcGCTACAACTGCATTTCTAGTAGAGATGAAACggagaaaacattttatttgtctGATTCTCTGCTTTGTTCTATCGCCGTAgccgctccctctcttcagtctctctctagtctctcaatgccagaccttcctctacagcgctgtggaggagggtctggctagtccacacagcattcctggatgggagaaaaacgtgctctggtttattggcatttctttaaaccaatcacaatcgtcgaggcgaaatagcctcgggaaggaacttgttttggtggaacgtgtacgttcaaaagtagtttgtCGTGCAAAACTAGTCCGAGACTGGCCTGAAACTTTTCCTGCAACGATccaaaattatttaatttcacTGAGAATCtatggtctgaactgggctttaaacCTCTGTGTTGCATAAACATGttcataaatacataaatgaataTAAAATGTTGAACAAGCGGCGTGATGTTAATGTTAGGACGCCAGCTTTTAACATGTATGCATGCacttattatttttgtattttttttaaacatatttcttTACGGAGATAAATACCATGAGAAGATGTAAGTAATTATTGTGGTACGGTAGTTTAATAAATACCTTGTTACTGTTTAGATTGATGTTGTTGGGCAGGTTTTGTTTTAAACTTCTGACAGATAACCACAGGAAGTAAAATCATGGTCGCCAATGTTATAAGTGCCATAAAACAGACTTTTATTTCTAATGTGAAGTGAAAATTGTCTTAACTGTGATATAATGTTGTCGTCATAGTTAATGTAAAAAGAGgggatacatttttgtatttctgaCTATAGATATTAATGGAAAATTAAAGAGGAAATTGTAATACTA

Function

symbol description
aldh5a1 Predicted to enable NAD binding activity and succinate-semialdehyde dehydrogenase (NAD+) activity. Predicted to act upstream of or within galactosylceramide metabolic process; gamma-aminobutyric acid catabolic process; and short-chain fatty acid metabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in succinic semialdehyde dehydrogenase deficiency. Orthologous to human ALDH5A1 (aldehyde dehydrogenase 5 family member A1).

NR:

description
succinate-semialdehyde dehydrogenase, mitochondrial

GO: NA

KEGG:

id description
K00139 ALDH5A1; succinate-semialdehyde dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805847.1 True 4181 mRNA 0.48 10 36855419 36869334
XM_039805848.1 False 3813 mRNA 0.48 11 36855699 36869334

Neighbor

gene id symbol gene type direction distance location
LOC120563178 NA coding upstream 25997 36809560 ~ 36829422 (+)
atp2c1 LOC103369286 coding upstream 62751 36760510 ~ 36792668 (+)
LOC120563185 NA coding upstream 313889 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 472323 36368694 ~ 36383096 (+)
nat16l NA coding upstream 488394 36360700 ~ 36367025 (+)
pik3r4 pik3r4 coding downstream 26055 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 455567 37324901 ~ 37326438 (+)
LOC120561884 NA coding downstream 466737 37336071 ~ 37351571 (+)
LOC120561883 NA coding downstream 485649 37354983 ~ 37359625 (+)
LOC120562463 NA coding downstream 492890 37362224 ~ 37377784 (+)
G78882 NA non-coding upstream 39443 36812715 ~ 36815976 (+)
G78870 NA non-coding upstream 61327 36752091 ~ 36794092 (+)
G78825 NA non-coding upstream 134939 36684833 ~ 36720480 (+)
G78865 NA non-coding upstream 156447 36692198 ~ 36698972 (+)
G78866 NA non-coding upstream 156912 36694103 ~ 36698507 (+)
G78907 NA non-coding downstream 44434 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 134249 37003583 ~ 37048033 (+)
G78921 NA non-coding downstream 140100 37009434 ~ 37010480 (+)
G78922 NA non-coding downstream 149870 37019204 ~ 37020468 (+)
G78925 NA non-coding downstream 172357 37041691 ~ 37089414 (+)
LOC120562457 NA other upstream 151426 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 185390 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 390189 36392252 ~ 36465230 (+)
G78772 NA other upstream 504424 36258160 ~ 36350995 (+)
G78759 NA other upstream 664580 36110851 ~ 36190839 (+)
G78989 NA other downstream 561837 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 661356 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1009582 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1187082 38056416 ~ 38145804 (+)
G79351 NA other downstream 1300720 38170054 ~ 38324620 (+)

Expression


Co-expression Network